Detailed information NTG1151279

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: P3C57_RS03200
• Genome accession: NZ_OU532556
• Coordinates: 627667..628617 (-)
• Length: 316 a.a.
• NCBI ID: WP_072224208.1
• Uniprot ID: -
• Organism: Campylobacter coli isolate
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 622667..633617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3C57_RS03165 (CC177238_000625)	-	622863..623063 (+)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-
P3C57_RS03170 (CC177238_000626)	-	623093..623392 (-)	300	WP_002777238.1	c-type cytochrome	-
P3C57_RS03175 (CC177238_000627)	-	623469..624032 (+)	564	WP_002787747.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
P3C57_RS03180 (CC177238_000628)	rfaD	624029..624982 (+)	954	WP_023890814.1	ADP-glyceromanno-heptose 6-epimerase	-
P3C57_RS03185 (CC177238_000629)	rfaE1	624975..626360 (+)	1386	WP_002872241.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
P3C57_RS03190 (CC177238_000630)	gmhA	626357..626917 (+)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
P3C57_RS03195 (CC177238_000631)	-	626917..627681 (+)	765	Protein_620	glycosyltransferase family 25 protein	-
P3C57_RS03200 (CC177238_000632)	waaF	627667..628617 (-)	951	WP_072224208.1	lipopolysaccharide heptosyltransferase II	Regulator
P3C57_RS03205 (CC177238_000633)	-	628676..629512 (+)	837	WP_072224207.1	glycosyltransferase family 2 protein	-
P3C57_RS03210 (CC177238_000634)	rfbA	629522..630400 (+)	879	WP_002782985.1	glucose-1-phosphate thymidylyltransferase RfbA	-
P3C57_RS03215 (CC177238_000635)	rfbB	630404..631435 (+)	1032	WP_072224206.1	dTDP-glucose 4,6-dehydratase	-
P3C57_RS03220 (CC177238_000636)	-	631432..631827 (+)	396	WP_002794360.1	sugar 3,4-ketoisomerase	-
P3C57_RS03225 (CC177238_000637)	-	631824..632495 (+)	672	WP_002794362.1	acetyltransferase	-
P3C57_RS03230 (CC177238_000638)	-	632499..633413 (+)	915	WP_002794364.1	hypothetical protein	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36144.90 Da
• Isoelectric Point: 10.4219

>NTDB_id=1151279 P3C57_RS03200 WP_072224208.1 627667..628617(-) (waaF) [Campylobacter coli isolate]
MKIFIHLPTWLGDAVMASSALYGVYHHFKNAEFILYGSFVSTALFKEFPNAKIIIENKKSRYKQALSLRKKLGKIDLALS
FRSALSSKIILHILKAKKRYFFNKYNFKEEHQVLKYLYFIENSLDIKAHSKDLKLPFKLKFQNPIILKNGKKILGLNPGA
SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHKLKEKNVKVKNLCNKTTIKMLCQNIAICDIFITNDS
GPMHIAAAYKTKTVAIFGPTKFTQTSPWQNQNAKLVHLNLSCMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=1151279 P3C57_RS03200 WP_072224208.1 627667..628617(-) (waaF) [Campylobacter coli isolate]
ATGAAAATTTTTATCCATCTTCCCACTTGGCTAGGCGATGCGGTTATGGCTTCATCTGCTTTATATGGAGTTTATCATCA
TTTTAAAAATGCTGAATTTATCCTTTATGGATCTTTTGTATCTACGGCACTTTTTAAAGAATTTCCTAATGCTAAAATCA
TTATAGAAAATAAAAAATCACGCTACAAGCAAGCCCTCTCTTTGCGTAAAAAACTTGGAAAAATAGATCTAGCCCTTTCT
TTTAGATCAGCCCTTTCTTCCAAGATCATTTTGCACATCCTGAAAGCAAAAAAAAGATATTTTTTTAACAAGTATAATTT
CAAAGAAGAACATCAGGTTTTAAAATATCTTTATTTTATAGAAAATTCACTAGATATTAAAGCTCATTCTAAGGATTTAA
AACTTCCTTTTAAATTAAAATTTCAAAATCCTATTATTTTAAAAAATGGTAAAAAAATCCTAGGCTTAAATCCTGGAGCA
AGTTTTGGAAGCGCTAAAAGATGGGATGCGAGTTATTTTGCACAAGTTGCTTTAAATTTTAGCAAAACTCATGAAATTTT
GATTTTTGGAGCAGGCAAGGCAGAACAAGAACTCTGCGATGAAATTTTTCATAAATTAAAAGAAAAAAATGTCAAGGTAA
AAAATCTTTGCAATAAAACCACTATCAAAATGCTTTGTCAAAATATCGCAATTTGTGATATTTTCATCACAAATGATAGC
GGTCCTATGCACATAGCTGCCGCTTATAAAACAAAAACTGTGGCTATCTTTGGGCCTACTAAATTTACCCAAACCTCACC
TTGGCAAAATCAAAATGCAAAATTAGTACATCTAAATTTATCTTGCATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (108-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	83.121	99.367	0.826