Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KOD61_RS10850 Genome accession   NZ_OU015430
Coordinates   2297162..2297560 (-) Length   132 a.a.
NCBI ID   WP_215218681.1    Uniprot ID   -
Organism   Novilysobacter luteus strain CECT 30171     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2292162..2302560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KOD61_RS10835 (LYB30171_02163) - 2294117..2296138 (-) 2022 WP_215218678.1 methyl-accepting chemotaxis protein -
  KOD61_RS10840 (LYB30171_02164) - 2296218..2296763 (-) 546 Protein_2124 chemotaxis protein CheW -
  KOD61_RS10845 (LYB30171_02165) - 2296778..2297143 (-) 366 WP_215218680.1 PleD family two-component system response regulator -
  KOD61_RS10850 (LYB30171_02166) pilG 2297162..2297560 (-) 399 WP_215218681.1 twitching motility response regulator PilG Regulator
  KOD61_RS10855 (LYB30171_02167) gshB 2297754..2298707 (+) 954 WP_215218682.1 glutathione synthase -
  KOD61_RS10860 (LYB30171_02168) - 2298704..2299579 (+) 876 WP_215218683.1 energy transducer TonB -
  KOD61_RS10865 (LYB30171_02169) tsaB 2299610..2300305 (-) 696 WP_215218684.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  KOD61_RS10870 (LYB30171_02170) - 2300302..2302395 (-) 2094 WP_215218685.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14747.98 Da        Isoelectric Point: 6.9546

>NTDB_id=1150997 KOD61_RS10850 WP_215218681.1 2297162..2297560(-) (pilG) [Novilysobacter luteus strain CECT 30171]
MQDEGRNGSLDGLRVMVIDDSKTIRRTAETLLKREGCSVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQIFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRTHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1150997 KOD61_RS10850 WP_215218681.1 2297162..2297560(-) (pilG) [Novilysobacter luteus strain CECT 30171]
ATGCAGGACGAGGGTCGCAACGGCAGCCTCGATGGGTTGCGAGTCATGGTTATCGATGACTCCAAGACCATCCGCCGTAC
CGCTGAAACGTTGCTCAAGCGCGAGGGTTGCTCGGTGGTCACCGCCACCGACGGGTTCGAGGCATTGGCCAAGATCGCCG
ACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCGCTGATCAAGAAC
AACCAGATTTTCAAGAGCACACCGGTCATCATGCTGTCGTCGAAGGATGGCCTTTTCGACAAGGCGCGGGGCCGGATCGT
CGGTTCCGAGCAGTACCTGACCAAGCCATTCACGCGCGAGGAACTCCTCGACGCGATCCGCACGCACGTCAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

93.939

0.689

Multiple sequence alignment