Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   KJA80_RS10030 Genome accession   NZ_OD940422
Coordinates   2093746..2095419 (+) Length   557 a.a.
NCBI ID   WP_010825092.1    Uniprot ID   -
Organism   Enterococcus faecalis isolate WE0851     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2088746..2100419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJA80_RS10000 (WE0851_02041) - 2088997..2089842 (+) 846 WP_002355876.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  KJA80_RS10005 (WE0851_02042) xseA 2089852..2091198 (+) 1347 WP_213044437.1 exodeoxyribonuclease VII large subunit -
  KJA80_RS10010 (WE0851_02043) - 2091200..2091430 (+) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  KJA80_RS10015 (WE0851_02044) - 2091430..2092311 (+) 882 WP_002355879.1 polyprenyl synthetase family protein -
  KJA80_RS10020 (WE0851_02045) - 2092325..2093140 (+) 816 WP_002355880.1 TlyA family RNA methyltransferase -
  KJA80_RS10025 (WE0851_02046) - 2093279..2093728 (+) 450 WP_002358881.1 ArgR family transcriptional regulator -
  KJA80_RS10030 (WE0851_02047) recN 2093746..2095419 (+) 1674 WP_010825092.1 DNA repair protein RecN Machinery gene
  KJA80_RS10035 (WE0851_02048) - 2095510..2095620 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  KJA80_RS10040 (WE0851_02049) - 2095688..2096653 (-) 966 WP_002386196.1 magnesium transporter CorA family protein -
  KJA80_RS10045 (WE0851_02050) - 2096898..2097290 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  KJA80_RS10050 (WE0851_02051) mraZ 2097525..2098010 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  KJA80_RS10055 (WE0851_02052) rsmH 2098025..2098981 (+) 957 WP_002355891.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  KJA80_RS10060 (WE0851_02053) ftsL 2098998..2099405 (+) 408 WP_002355892.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62655.07 Da        Isoelectric Point: 4.5772

>NTDB_id=1150625 KJA80_RS10030 WP_010825092.1 2093746..2095419(+) (recN) [Enterococcus faecalis isolate WE0851]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTRAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKSLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=1150625 KJA80_RS10030 WP_010825092.1 2093746..2095419(+) (recN) [Enterococcus faecalis isolate WE0851]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGCGGCTCCAGTGATT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGAATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACGGGCATATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGT
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATATAAATC
ATTGTCAGATACTGTTCAAAATGCCTACTACTTACTACAAGAAGCTAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGATGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATTACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGCGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCGGCTCATCAACAAGCGTTAGCTTTGCGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTCGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACGGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGTTGGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTCAGTGGCCGGGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCAGCCGTTGCTGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCACGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501

Multiple sequence alignment