Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   PJ19_RS06760 Genome accession   NZ_CP010072
Coordinates   1239112..1239606 (+) Length   164 a.a.
NCBI ID   WP_002857890.1    Uniprot ID   Q9PN97
Organism   Campylobacter jejuni subsp. jejuni strain 01-1512     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1234112..1244606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJ19_RS06745 (PJ19_06745) - 1235498..1236676 (-) 1179 WP_002927156.1 metal-dependent hydrolase -
  PJ19_RS06750 (PJ19_06750) gpsA 1236686..1237582 (-) 897 WP_002859277.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  PJ19_RS06755 (PJ19_06755) gatB 1237579..1238997 (-) 1419 WP_043012901.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB -
  PJ19_RS06760 (PJ19_06760) luxS 1239112..1239606 (+) 495 WP_002857890.1 S-ribosylhomocysteine lyase Regulator
  PJ19_RS06765 (PJ19_06765) - 1239918..1240910 (+) 993 WP_002858100.1 isopenicillin N synthase family oxygenase -
  PJ19_RS06770 (PJ19_06770) - 1240921..1241691 (+) 771 WP_002857994.1 MetQ/NlpA family ABC transporter substrate-binding protein -
  PJ19_RS06775 (PJ19_06775) metE 1241703..1243967 (+) 2265 WP_014516816.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -

Sequence

Protein


Download         Length: 164 a.a.        Molecular weight: 18209.18 Da        Isoelectric Point: 6.6314

>NTDB_id=115053 PJ19_RS06760 WP_002857890.1 1239112..1239606(+) (luxS) [Campylobacter jejuni subsp. jejuni strain 01-1512]
MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPNKDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISP
MGCRTGFYMSLIGTPDEKSIAKAWEAAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIINNKELK
LENA

Nucleotide


Download         Length: 495 bp        

>NTDB_id=115053 PJ19_RS06760 WP_002857890.1 1239112..1239606(+) (luxS) [Campylobacter jejuni subsp. jejuni strain 01-1512]
ATGCCATTATTAGACAGCTTTAAAGTTGACCATACTAAAATGCCAGCTCCTGCTGTGCGTTTAGCTAAAGTTATGAAAAC
ACCTAAGGGTGATGATATTAGCGTATTTGATTTGCGTTTTTGCATACCAAATAAAGACATTATGAGCGAAAAAGGTACTC
ATACCTTAGAACATTTATTCGCAGGATTTATGAGAGATCATCTTAATTCAAATTCAGTTGAAATTATTGATATTTCACCT
ATGGGTTGTCGCACGGGTTTTTATATGAGTTTAATTGGAACACCTGATGAGAAAAGTATTGCAAAAGCTTGGGAAGCAGC
CATGAAAGATGTTTTAAGCGTAAGCGATCAAAGCAAAATTCCTGAACTTAATATCTACCAATGCGGAACTTGCGCAATGC
ATTCTTTAGATGAAGCCAAACAAATTGCCCAAAAAGTTTTAAATCTAGGTATTAGCATAATAAATAACAAAGAATTAAAA
CTCGAGAATGCTTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-154)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9PN97

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

72.05

98.171

0.707