Detailed information NTG1150279

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: HUW69_RS11115
• Genome accession: NZ_LT992490
• Coordinates: 2490295..2493828 (+)
• Length: 1177 a.a.
• NCBI ID: WP_174566572.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain 4295STDY6534200
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2485295..2498828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUW69_RS11095 (SAMEA4374365_02260)	erpA	2485874..2486215 (-)	342	WP_000005743.1	iron-sulfur cluster insertion protein ErpA	-
HUW69_RS11100 (SAMEA4374365_02261)	hemL	2486499..2487797 (+)	1299	WP_000167256.1	glutamate-1-semialdehyde 2,1-aminomutase	-
HUW69_RS11105 (SAMEA4374365_02263)	-	2488051..2489136 (+)	1086	WP_001290819.1	AI-2E family transporter	-
HUW69_RS11110 (SAMEA4374365_02264)	rsmC	2489209..2490231 (+)	1023	WP_001183371.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
HUW69_RS11115 (SAMEA4374365_02265)	chiS	2490295..2493828 (+)	3534	WP_174566572.1	two-component system sensor histidine kinase ChiS	Regulator
HUW69_RS11120 (SAMEA4374365_02266)	-	2494739..2496409 (+)	1671	WP_000880700.1	ABC transporter substrate-binding protein	-
HUW69_RS11125 (SAMEA4374365_02267)	-	2496579..2497565 (+)	987	WP_032480002.1	ABC transporter permease	-
HUW69_RS11130 (SAMEA4374365_02268)	-	2497568..2498593 (+)	1026	WP_000646275.1	ABC transporter permease	-

Sequence

Protein

• Length: 1177 a.a.
• Molecular weight: 133301.56 Da
• Isoelectric Point: 6.9113

>NTDB_id=1150279 HUW69_RS11115 WP_174566572.1 2490295..2493828(+) (chiS) [Vibrio cholerae strain 4295STDY6534200]
MRLCPRFSLDLLVKVKKLVNFVTLGFPCLSPTHAWRSPQSFTESNTLIMFRFYRKQKFKRLQNTLMAAFLALSIIPLTIT
ALFFLHSHSKDLEQQSTSYLVSVRDNKQQQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQ
QRYIAGSGDQIKTSILPQSSSYVGSERYRLLHKRYHWAYLELLKRSDFDDILLVDIDGNVVYSIYKYDNFGTNLLTGKYQ
DSNLGHTFKRLEHTVNEQRKNNEDFTPVVISDFVQENGKQYAWLGAPIIQQGYLHSYAMFRLPSNAITKLIAEGSSYPSM
QTILVGQDHRSRTLTSAEIAVEKSKEVVDLALSGKRVVGTYTNTDGEQIIAAYAPINLKNIHWALVVELPEKEAFARVRQ
LEKLFVFAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLI
KSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDIIISSGQRLA
TLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKY
TSEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDSSRYRQGAGLGLSISRQLIELMHGTLYVSSQPMV
GTTFSFTLPLASEEEIAQARLTELPHFQAPEVLDTELPEQSTLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQ
DGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA
ARIVAHLTASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANEAAARLFRRTPEQ
LKRSNAEELIAPKFLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPQGSGLQAMYIFNVGGSINAARIHNLETAVEALSSY
AFEGDKDKLQKLKELGGEFTRIADKASGEYQSKQDLMRAVLVEAMTSALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQ
TRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCKEAGPERTHIEMQRDKLQKLLTSE

Nucleotide

• Length: 3534 bp

>NTDB_id=1150279 HUW69_RS11115 WP_174566572.1 2490295..2493828(+) (chiS) [Vibrio cholerae strain 4295STDY6534200]
TTGCGTCTATGCCCACGCTTTAGCTTGGACTTACTTGTCAAAGTAAAAAAACTCGTTAATTTCGTTACTTTAGGTTTTCC
TTGTCTATCACCAACTCATGCTTGGCGATCGCCGCAGAGTTTCACCGAAAGTAACACCTTAATTATGTTTAGGTTCTATC
GAAAACAAAAATTCAAACGCCTGCAAAATACCTTGATGGCCGCATTTTTGGCCCTCAGCATTATTCCGTTGACCATTACT
GCGTTGTTTTTCCTACATTCACACAGTAAAGATCTGGAGCAACAGAGCACATCTTACTTGGTTTCAGTTCGGGATAATAA
ACAGCAACAGGTCATCGACTACATGATGGCCAAAGAGTCGGAAGTAATGGGCTTTGTCCGCTCCGAATTAGCTTATGCCA
GTGGCGGACGTTTTTACGGTCTGGTCAATGCTTTTCAGCGCTTAGACGTCAGTATTGAAGCGGCTCGTGAACATGCTCAG
CAGCGCTATATTGCTGGCTCTGGTGACCAAATTAAAACATCAATACTTCCTCAATCAAGCAGCTATGTTGGCAGTGAGCG
CTACAGACTGCTGCATAAACGCTATCACTGGGCTTATTTAGAACTACTTAAACGGTCGGATTTTGATGACATCTTATTAG
TCGATATTGATGGCAACGTCGTTTATTCGATCTATAAATATGACAACTTTGGTACAAATTTATTAACGGGTAAATATCAA
GACTCCAATCTAGGCCATACCTTCAAACGTTTAGAACACACGGTCAATGAACAGCGCAAAAACAACGAAGATTTCACCCC
CGTCGTGATTTCTGATTTTGTGCAAGAGAATGGCAAACAATACGCTTGGCTTGGCGCACCGATTATTCAGCAAGGCTATT
TACATAGCTACGCCATGTTCCGTTTACCGAGCAATGCGATCACAAAACTTATCGCAGAAGGCAGTAGCTATCCTTCTATG
CAAACTATTTTAGTGGGGCAAGATCACCGCTCAAGAACCTTAACTTCCGCCGAAATTGCGGTTGAAAAAAGCAAAGAAGT
GGTCGATTTAGCCTTATCGGGTAAACGCGTCGTAGGCACTTACACCAATACCGATGGTGAACAGATCATCGCAGCCTACG
CACCGATCAATTTGAAAAATATTCATTGGGCTTTGGTGGTGGAACTGCCTGAGAAAGAAGCGTTTGCTCGCGTTCGTCAG
TTAGAAAAGCTGTTTGTTTTTGCGATGTTGACGGCCATTGTCTTAGTGGTCATCGCCTCGCATTACCTTTCCAACTTCAT
TACCTCTCCGCTTTTGAAGCTGACATGGGCAGCCGAACGTGTTTCGGCAGGCGATCTTGATGAAGCCATGATCAATACCG
AACGCAAAGATGAAATTGGCCGCTTGGCGGTCAGTTTTGAGCGTATGCAGCGTTCCATTCGCGAAAAAATATCGCTGATC
AAATCGCAAAATAAAGAGTTAGAGAGCAATTTACTGATCATTCGTAAGCAAAACGATGAGTTACAACTAGCAAATAAGCT
AAAAGATGAGTTCCTCGCGACCACATCACATGAATTACGTACCCCATTACATGGCATGATTGGCATTGCCGAAGCGCTAA
TCTCGGGGGCAAATGGCCCTATTTCAGCGGCGCACAAGTATCAACTCGACATCATTATCAGCAGTGGGCAGCGTTTGGCG
ACTCTGGTTGATGACCTACTCGATTACCACAAAATGCGCTATGGCGCGCTGGATATTCAAAGGTGTGCCGTCGATTTATC
GAGCGCCACGCGCTTGGTCTTGGAGCTTTCTCACCATTTACTTGGCAAGAAAACGCTGCGCATTATTAATCAAGTCTCAG
AACAACCAGTCTGGGTTTCTGCGGATCCTCAACGCTTAGAGCAAGTCCTGTATAACTTGATCGGCAATGCCATTAAGTAC
ACTTCCGAAGGCAAAATTGTTATCTCCGCAACCTATATTGACGATAAAGTGCGAGTGCAGGTGGTGGATACAGGTCAAGG
GATTCCGGCAGAACAACTGGAGCACATCTTTGAACCATTGATCCAAGCGGGTCATGATTCGAGTCGCTATCGCCAAGGCG
CAGGACTCGGGCTTTCCATCAGTCGCCAGTTAATCGAATTGATGCACGGCACTCTCTACGTAAGTAGTCAGCCGATGGTT
GGCACTACCTTTAGCTTCACGCTGCCTCTGGCGAGCGAAGAAGAGATTGCTCAAGCACGCTTGACCGAGCTCCCCCACTT
CCAAGCACCGGAAGTGTTGGATACTGAACTGCCCGAGCAAAGCACCTTACCTGAAAATGAACATGGCCCACTTCTGTTGG
TCGCTGATGATGAGCCTGTCAACTTGCGTGTGCTGGACAGCTTTTTACGTCTTGAAGGTTATCGCGTACATACCGCACAA
GATGGCCATCAAGTACTTGAAGCAATTAAACGTGAAAAACCTGAATTGGTGTTACTCGACATCATGATGCCAGGCATGAG
CGGTTATCAAGTGTGTGAAAAACTTCGACAAACTTACGACCACGCTGAACTGCCTATTATTATGCTGACGGCTCTCAACC
AGTCTGACGACCGAGTACGAGGGTTTGAAGCTGGAGCCAATGACTACTTATCCAAACCATTCAACAAACAAGAGCTGGCC
GCGCGCATTGTCGCTCACCTCACGGCGAGCAAAGCCGAACTGCGCCGCATCGAGAATGCCCAACTGCAAAAAGAGTTGAA
ACATCGCGCTATGGTAGAAGCGAGCCTATTGGAAACCCAAGGCCGATTATTGGAACAGTTAGAATCTGCGCCAGAAGCGA
TTTTGTGCGTTAAAGAGGGCAATAAAGTACGTTTTGCTAACGAAGCGGCAGCACGTTTATTTAGACGCACCCCTGAGCAG
CTCAAACGCTCCAATGCCGAAGAACTGATTGCACCTAAATTCTTGAATATTGAACAAGAACATTACTGCGGCAATATTGA
TGTTTACGTTGATGATGTGCGCCAACACCTCTCTGCCGATGTCCTGCGCTTGCCACAAGGCTCTGGCTTACAAGCGATGT
ACATTTTTAATGTTGGCGGCAGCATCAATGCCGCGCGGATTCATAACCTAGAAACCGCGGTAGAAGCCCTGTCTAGCTAT
GCCTTCGAAGGCGATAAAGACAAGCTGCAAAAACTCAAGGAGCTGGGTGGCGAGTTTACTCGTATTGCTGATAAAGCCTC
TGGCGAGTATCAATCGAAACAAGATTTAATGCGCGCCGTGTTAGTCGAAGCCATGACCAGTGCCTTGAACTATTGGGAAC
GAGTCTCAGGACAAAGCAAGTTCACGTTTGCCGAACAAAGTGGATTATGGCGCGTTTATCTTGACCGCAGCACCCTACAA
ACTCGTACCCTAGACAAATACCTACGAATTGAGACACTGCCTAAAACACCGCGTTGGCGAACTGTACTGAACTCGCTCGA
CTATATTCTTGAGCATTGCAAAGAAGCAGGCCCTGAACGCACTCACATCGAAATGCAGCGCGATAAATTGCAAAAACTCC
TGACCAGTGAGTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (622-731)

• PAS domain (PAS_8) (927-961)

• His Kinase A (phospho-acceptor) domain (HisKA) (508-573)

• HAMP domain (HAMP) (423-475)

• Response regulator receiver domain (Response_reg) (773-883)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	98.726	100	0.987