Detailed information NTG1150256

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HUW69_RS01250
• Genome accession: NZ_LT992490
• Coordinates: 281865..282872 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain 4295STDY6534200
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 276865..287872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUW69_RS01230 (SAMEA4374365_00255)	metJ	276869..277186 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
HUW69_RS01235 (SAMEA4374365_00256)	-	277297..278574 (-)	1278	WP_029627698.1	malic enzyme-like NAD(P)-binding protein	-
HUW69_RS01240 (SAMEA4374365_00257)	rpmE	278882..279100 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
HUW69_RS01245 (SAMEA4374365_00258)	priA	279355..281559 (+)	2205	WP_174566421.1	primosomal protein N'	-
HUW69_RS01250 (SAMEA4374365_00259)	cytR	281865..282872 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
HUW69_RS01255 (SAMEA4374365_00260)	-	283044..283595 (+)	552	WP_001891621.1	SPOR domain-containing protein	-
HUW69_RS01260 (SAMEA4374365_00261)	hslV	283732..284289 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
HUW69_RS01265 (SAMEA4374365_00262)	hslU	284355..285686 (+)	1332	WP_001293366.1	HslU--HslV peptidase ATPase subunit	-
HUW69_RS01270 (SAMEA4374365_00263)	-	285790..286707 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HUW69_RS01275 (SAMEA4374365_00264)	rraA	286782..287297 (+)	516	WP_000456242.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=1150256 HUW69_RS01250 WP_000224452.1 281865..282872(+) (cytR) [Vibrio cholerae strain 4295STDY6534200]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=1150256 HUW69_RS01250 WP_000224452.1 281865..282872(+) (cytR) [Vibrio cholerae strain 4295STDY6534200]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCCTCCACTCGCAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGTTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCCGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGTATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCCGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTCGAATTATTGCGTGGACATGATGTGCGTGCAGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904