Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DXE38_RS09025 Genome accession   NZ_LT992477
Coordinates   1809862..1810527 (+) Length   221 a.a.
NCBI ID   WP_000697873.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 22_LA_562     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1804862..1815527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE38_RS09000 - 1806271..1807032 (+) 762 WP_000323448.1 alpha/beta hydrolase -
  DXE38_RS09005 - 1807276..1807731 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  DXE38_RS15200 - 1807853..1807954 (+) 102 WP_000731972.1 SE2200 family small protein -
  DXE38_RS09015 - 1808014..1809438 (-) 1425 WP_000953736.1 alkaline phosphatase -
  DXE38_RS09020 - 1809636..1809836 (+) 201 WP_000604731.1 hypothetical protein -
  DXE38_RS09025 braR 1809862..1810527 (+) 666 WP_000697873.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  DXE38_RS09030 braS 1810538..1811425 (+) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  DXE38_RS09035 - 1811533..1812287 (+) 755 Protein_1709 ABC transporter ATP-binding protein -
  DXE38_RS09040 - 1812284..1814284 (+) 2001 WP_000776741.1 ABC transporter permease -
  DXE38_RS09045 - 1814953..1815066 (+) 114 WP_014937089.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25434.46 Da        Isoelectric Point: 4.6079

>NTDB_id=1150139 DXE38_RS09025 WP_000697873.1 1809862..1810527(+) (braR) [Staphylococcus aureus isolate 22_LA_562]
MKILIVEDDFVIAESLASELEKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1150139 DXE38_RS09025 WP_000697873.1 1809862..1810527(+) (braR) [Staphylococcus aureus isolate 22_LA_562]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTGAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACTCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment