Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   DXE60_RS01200 Genome accession   NZ_LT992461
Coordinates   189730..190446 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus isolate 8_LA_272     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 184730..195446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE60_RS01170 - 184998..185624 (+) 627 WP_000522384.1 nitroreductase family protein -
  DXE60_RS01175 - 185932..186717 (+) 786 WP_000867947.1 carbon-nitrogen family hydrolase -
  DXE60_RS15385 hld 187319..187399 (-) 81 WP_000046022.1 delta-hemolysin -
  DXE60_RS01185 agrB 187689..188258 (+) 570 WP_001105708.1 accessory gene regulator AgrB -
  DXE60_RS01190 agrD 188255..188395 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  DXE60_RS01195 agrC 188420..189711 (+) 1292 Protein_193 quorum-sensing sensor histidine kinase AgrC -
  DXE60_RS01200 agrA 189730..190446 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  DXE60_RS01205 - 190820..191779 (-) 960 WP_001253294.1 carbohydrate kinase family protein -
  DXE60_RS01210 - 191776..193260 (-) 1485 WP_000141407.1 sucrose-6-phosphate hydrolase -
  DXE60_RS01215 - 193409..194359 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1149402 DXE60_RS01200 WP_000688492.1 189730..190446(+) (agrA) [Staphylococcus aureus isolate 8_LA_272]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1149402 DXE60_RS01200 WP_000688492.1 189730..190446(+) (agrA) [Staphylococcus aureus isolate 8_LA_272]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment