Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   W903_RS02810 Genome accession   NZ_CP006910
Coordinates   501400..502473 (+) Length   357 a.a.
NCBI ID   WP_000790651.1    Uniprot ID   A0AAW6XPT9
Organism   Streptococcus agalactiae CNCTC 10/84     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 496400..507473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  W903_RS02780 (W903_0572) - 497290..498354 (+) 1065 WP_000021299.1 MmcQ/YjbR family DNA-binding protein -
  W903_RS02785 (W903_0573) asnA 498470..499462 (+) 993 WP_000748011.1 aspartate--ammonia ligase -
  W903_RS02790 (W903_0574) - 499507..499956 (-) 450 WP_000592257.1 hypothetical protein -
  W903_RS02795 (W903_0575) rsmD 500087..500626 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  W903_RS02800 (W903_0576) - 500638..500928 (+) 291 WP_000384889.1 hypothetical protein -
  W903_RS02805 (W903_0577) coaD 500925..501410 (+) 486 WP_000161893.1 pantetheine-phosphate adenylyltransferase -
  W903_RS02810 (W903_0578) sepM 501400..502473 (+) 1074 WP_000790651.1 SepM family pheromone-processing serine protease Regulator
  W903_RS02815 (W903_0579) - 502548..503882 (+) 1335 WP_000137523.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  W903_RS02820 (W903_0580) - 503952..504530 (+) 579 WP_001224500.1 YutD-like domain-containing protein -
  W903_RS02825 (W903_0581) rlmN 504581..505687 (+) 1107 WP_001124994.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  W903_RS02830 (W903_0582) - 505687..506202 (+) 516 WP_000919803.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39131.31 Da        Isoelectric Point: 10.4286

>NTDB_id=114938 W903_RS02810 WP_000790651.1 501400..502473(+) (sepM) [Streptococcus agalactiae CNCTC 10/84]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=114938 W903_RS02810 WP_000790651.1 501400..502473(+) (sepM) [Streptococcus agalactiae CNCTC 10/84]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAACTATCAAGAGGCAAAGGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.027

94.958

0.655


Multiple sequence alignment