Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   DXE63_RS07730 Genome accession   NZ_LT992458
Coordinates   1476349..1477392 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus isolate 7_4623     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1471349..1482392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE63_RS07695 - 1472074..1472184 (+) 111 WP_014937049.1 hypothetical protein -
  DXE63_RS07700 - 1472213..1472626 (+) 414 WP_025174370.1 hypothetical protein -
  DXE63_RS07705 - 1472815..1473801 (-) 987 WP_000999712.1 FUSC family protein -
  DXE63_RS07715 map 1474275..1475033 (+) 759 WP_000636145.1 type I methionyl aminopeptidase -
  DXE63_RS07720 - 1475250..1475636 (+) 387 WP_001110182.1 hypothetical protein -
  DXE63_RS07725 liaF 1475651..1476352 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  DXE63_RS07730 vraS 1476349..1477392 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  DXE63_RS07735 vraR 1477382..1478011 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  DXE63_RS07740 - 1478124..1479341 (-) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  DXE63_RS07745 - 1479619..1479894 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  DXE63_RS07750 - 1479901..1480365 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  DXE63_RS07755 - 1480512..1480712 (+) 201 WP_000180460.1 DUF1128 family protein -
  DXE63_RS07760 - 1480715..1481971 (+) 1257 WP_074347694.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1149321 DXE63_RS07730 WP_001017131.1 1476349..1477392(+) (vraS) [Staphylococcus aureus isolate 7_4623]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1149321 DXE63_RS07730 WP_001017131.1 1476349..1477392(+) (vraS) [Staphylococcus aureus isolate 7_4623]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTTCTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAATTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAATTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment