Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C6H34_RS24805 Genome accession   NZ_LT963395
Coordinates   5336897..5337307 (-) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas cerasi isolate PL963     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5331897..5342307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C6H34_RS24790 (PL963_04848) - 5333838..5335880 (-) 2043 WP_032609251.1 methyl-accepting chemotaxis protein -
  C6H34_RS24795 (PL963_04849) - 5335931..5336470 (-) 540 WP_003432055.1 chemotaxis protein CheW -
  C6H34_RS24800 (PL963_04850) pilH 5336485..5336850 (-) 366 WP_003316741.1 twitching motility response regulator PilH -
  C6H34_RS24805 (PL963_04851) pilG 5336897..5337307 (-) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  C6H34_RS24810 (PL963_04852) gshB 5337562..5338521 (+) 960 WP_003316740.1 glutathione synthase -
  C6H34_RS24815 (PL963_04853) - 5338688..5339590 (+) 903 WP_065350796.1 energy transducer TonB -
  C6H34_RS24820 (PL963_04854) - 5339666..5340238 (+) 573 WP_003366147.1 YqgE/AlgH family protein -
  C6H34_RS24825 (PL963_04855) ruvX 5340238..5340678 (+) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  C6H34_RS24830 (PL963_04856) pyrR 5340934..5341446 (+) 513 WP_003366144.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=1148797 C6H34_RS24805 WP_002551738.1 5336897..5337307(-) (pilG) [Pseudomonas cerasi isolate PL963]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1148797 C6H34_RS24805 WP_002551738.1 5336897..5337307(-) (pilG) [Pseudomonas cerasi isolate PL963]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACGCTGCT
CAAGAACGCAGGCTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAG
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment