Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   V529_RS21210 Genome accession   NZ_CP006890
Coordinates   339556..339720 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis SQR9     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 334556..344720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V529_RS21205 srfAB 336501..339491 (+) 2991 Protein_319 surfactin non-ribosomal peptide synthetase SrfAB -
  V529_RS21210 comS 339556..339720 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=114879 V529_RS21210 WP_269195014.1 339556..339720(+) (comS) [Bacillus velezensis SQR9]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=114879 V529_RS21210 WP_269195014.1 339556..339720(+) (comS) [Bacillus velezensis SQR9]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment