Detailed information NTG1148505

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LSAJ54_RS05595
• Genome accession: NZ_LT960790
• Coordinates: 1110035..1112302 (-)
• Length: 755 a.a.
• NCBI ID: WP_099947352.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain J54
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1105035..1117302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSAJ54_RS05570 (LSAJ54_1117)	-	1105157..1106104 (-)	948	WP_056946677.1	hypothetical protein	-
LSAJ54_RS05575 (LSAJ54_1118)	-	1106193..1107911 (-)	1719	WP_056946680.1	ribonuclease J	-
LSAJ54_RS05580 (LSAJ54_1119)	rpsO	1108139..1108408 (-)	270	WP_011374766.1	30S ribosomal protein S15	-
LSAJ54_RS05585 (LSAJ54_1121)	rpsT	1108687..1108941 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
LSAJ54_RS05590 (LSAJ54_1122)	holA	1109010..1110038 (-)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
LSAJ54_RS05595 (LSAJ54_1123)	comEC	1110035..1112302 (-)	2268	WP_099947352.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LSAJ54_RS05600 (LSAJ54_1124)	-	1112299..1112787 (-)	489	WP_011374770.1	ComE operon protein 2	-
LSAJ54_RS05605 (LSAJ54_1125)	comEA	1112845..1113552 (-)	708	WP_231952379.1	helix-hairpin-helix domain-containing protein	Machinery gene
LSAJ54_RS05610 (LSAJ54_1126)	-	1113624..1114670 (-)	1047	WP_099947353.1	SepM family pheromone-processing serine protease	-
LSAJ54_RS05615 (LSAJ54_1127)	coaD	1114672..1115169 (-)	498	WP_011374773.1	pantetheine-phosphate adenylyltransferase	-
LSAJ54_RS05620 (LSAJ54_1128)	rsmD	1115182..1115736 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LSAJ54_RS05625 (LSAJ54_1129)	-	1115741..1116031 (-)	291	WP_076632420.1	YlbG family protein	-
LSAJ54_RS05630 (LSAJ54_1130)	-	1116055..1117143 (-)	1089	WP_099947354.1	CAP-associated domain-containing protein	-

Sequence

Protein

• Length: 755 a.a.
• Molecular weight: 85387.17 Da
• Isoelectric Point: 10.0762

>NTDB_id=1148505 LSAJ54_RS05595 WP_099947352.1 1110035..1112302(-) (comEC) [Latilactobacillus sakei strain J54]
MKNNWIYPVICLISLNSLMLGGQSWLTWSLLLLAFVKLISLRQTQITIMTIGLCLVYGGRFWISYHSVTQPQQPVAQYFK
VQPDAIQVAGDSVQLTAIGQQDGQTIKAYYRCQTFAEKRRWQQVRHPVLFYGEKDFKRIQGATNQNEFDYARFLAQQKRC
FYQLTLAKKTTFALRRPSSGLDWLHYWRQTCALYLRKLPTALRFHAQTLLLGLREAQVDHYQVVLGHLGIIHLLSLSGLH
VFYLVQVIRWCATYCRIPREWLNCMLFGLLPVYALLVGGTTSISRAIALILSRLLCKQLGIRQSRLDSWSLVLLVNLFWQ
PYLLHSMGGILSYLMAFALIYIGEGSTFKVAYWLSLLSLPVCLRFNYRWHVLTIMMNALVTPIYLPIVLGLVIVASVMLP
VSNLVVNGCEWLLQLIYKGLGLVAQIPHAMITFGKIPLLPLLLIVTVSLLLIDGQAISNQWRKRLKRTLVSLYLASFLAI
HFNPTGRVVMFDIGQGDSLLIQTPFNRHQLLIDTGGRLALPQAAWQRRAQVSRAEKVTVNYLYSQGVDHIDAVALSHQDA
DHIGDLNQILKQIRVDRIICAAGLPQNRQFQRQIRPFLATVQIEPYLAGAAFKVGSQKFNVLAPTKPGKGENSDSLVLQA
QIGGASWLFTGDLEQEGERAIIERYPQLTVDYLKVGHHGSKTASDPTVIKKLHLKGALISTGRENRYGHPHQETLTTLQA
AKVPYWLTAQQGMLTWAYGPGQSEKLQTTIKDSEK

Nucleotide

• Length: 2268 bp

>NTDB_id=1148505 LSAJ54_RS05595 WP_099947352.1 1110035..1112302(-) (comEC) [Latilactobacillus sakei strain J54]
ATGAAAAACAACTGGATTTATCCAGTTATTTGTTTAATCAGTTTAAATAGCTTAATGCTTGGGGGGCAATCTTGGTTAAC
CTGGAGCTTATTATTATTGGCTTTTGTCAAATTAATAAGTCTCAGACAAACTCAGATAACGATTATGACGATCGGCTTAT
GCCTTGTTTACGGGGGCCGCTTTTGGATAAGCTATCATAGTGTGACGCAACCGCAACAACCGGTAGCACAGTACTTTAAA
GTGCAACCCGATGCGATTCAAGTAGCGGGCGATAGTGTCCAATTAACGGCAATCGGCCAACAAGATGGTCAGACTATTAA
GGCTTATTATCGCTGCCAAACGTTCGCCGAGAAGCGGCGATGGCAGCAAGTACGACACCCCGTTTTGTTCTATGGGGAAA
AAGATTTTAAACGTATACAGGGTGCTACCAATCAAAATGAGTTTGATTATGCCCGTTTTTTAGCGCAACAGAAGCGCTGC
TTTTACCAACTGACGTTAGCCAAAAAAACAACTTTTGCGCTGAGACGCCCTAGTAGCGGTTTGGATTGGCTACATTATTG
GCGCCAAACGTGTGCACTGTATTTACGTAAGTTACCAACAGCACTACGGTTTCATGCGCAGACGTTACTATTAGGTTTGC
GGGAAGCGCAAGTTGACCATTACCAGGTTGTTTTGGGCCACTTAGGGATTATTCATCTCTTAAGTCTATCAGGGTTGCAC
GTGTTTTATTTAGTGCAAGTCATTCGGTGGTGTGCGACTTATTGCCGCATACCGCGTGAGTGGTTAAACTGTATGTTATT
TGGGCTATTGCCGGTATATGCCTTACTGGTTGGTGGTACGACAAGCATTAGTCGCGCGATTGCGCTTATTTTATCCCGGT
TACTTTGCAAACAGTTGGGCATTCGGCAATCAAGGTTAGATAGTTGGAGTTTAGTATTACTGGTCAATTTATTCTGGCAG
CCTTATTTGCTACATAGTATGGGCGGGATTTTAAGTTATTTGATGGCCTTTGCGCTCATTTATATTGGTGAGGGTAGCAC
TTTTAAAGTTGCTTACTGGCTAAGTTTATTGAGTTTGCCGGTTTGCTTACGCTTTAATTATCGCTGGCATGTGCTGACGA
TAATGATGAATGCCTTGGTAACGCCTATCTATCTGCCAATTGTGCTAGGTTTGGTGATTGTAGCGAGTGTGATGTTACCT
GTTAGCAATCTAGTGGTTAACGGATGTGAGTGGCTGTTACAGTTGATTTACAAAGGCTTAGGACTAGTTGCTCAAATTCC
CCATGCGATGATTACGTTTGGTAAAATACCATTATTACCGTTACTATTGATTGTGACGGTCAGTCTCTTGTTAATCGATG
GCCAGGCAATTAGTAATCAATGGCGTAAACGGCTGAAACGCACATTGGTAAGTTTGTATCTGGCTAGTTTTTTGGCGATT
CATTTTAATCCGACTGGTCGGGTGGTCATGTTTGATATTGGTCAAGGTGATAGTCTGTTGATTCAGACGCCGTTTAACCG
GCATCAGCTTTTAATCGATACTGGTGGTCGCCTAGCGCTACCGCAAGCAGCTTGGCAACGGCGGGCGCAGGTTTCACGAG
CGGAAAAAGTAACGGTTAATTATCTCTATAGCCAAGGAGTAGATCACATTGATGCGGTGGCACTTTCTCATCAGGATGCC
GATCATATTGGTGATTTGAACCAGATTTTAAAACAAATTCGTGTTGATCGAATCATTTGTGCTGCCGGATTACCGCAAAA
TCGGCAATTTCAAAGACAAATTCGACCATTTTTAGCAACGGTTCAGATAGAACCCTATTTAGCCGGGGCCGCTTTTAAAG
TGGGATCGCAAAAATTTAACGTCTTAGCACCGACTAAGCCGGGAAAAGGCGAAAATAGTGATTCGTTAGTCTTACAGGCA
CAAATTGGTGGGGCTAGCTGGCTTTTTACAGGAGATCTAGAACAAGAAGGTGAACGGGCAATTATCGAGCGGTATCCACA
ATTAACCGTCGATTATTTAAAAGTTGGCCATCATGGTAGTAAAACGGCTAGTGACCCCACCGTGATTAAAAAATTGCACT
TAAAAGGCGCATTAATCTCAACCGGCAGAGAGAATCGTTATGGTCATCCGCACCAGGAAACTTTGACGACTTTGCAAGCG
GCCAAAGTGCCTTATTGGCTAACGGCGCAGCAGGGGATGTTGACCTGGGCGTACGGTCCCGGTCAAAGCGAAAAACTGCA
AACAACAATAAAGGATAGTGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (209-452)

• Metallo-beta-lactamase superfamily (Lactamase_B) (494-702)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Latilactobacillus sakei subsp. sakei 23K	99.603	100	0.996