Detailed information NTG1148331

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: VTAP4600_RS25090
• Genome accession: NZ_LT960612
• Coordinates: 1806956..1808131 (+)
• Length: 391 a.a.
• NCBI ID: WP_102525395.1
• Uniprot ID: A0A2N8ZN93
• Organism: Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 1801956..1813131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VTAP4600_RS25070 (VTAP4600_B1769)	-	1801968..1802762 (+)	795	WP_102525391.1	EAL domain-containing protein	-
VTAP4600_RS25075 (VTAP4600_B1770)	-	1802818..1803804 (-)	987	WP_102525392.1	CobW family GTP-binding protein	-
VTAP4600_RS25080 (VTAP4600_B1772)	clcA	1804248..1805660 (+)	1413	WP_102525393.1	H(+)/Cl(-) exchange transporter ClcA	-
VTAP4600_RS25085 (VTAP4600_B1773)	-	1805776..1806720 (+)	945	WP_102525394.1	TDT family transporter	-
VTAP4600_RS25090 (VTAP4600_B1774)	cqsA	1806956..1808131 (+)	1176	WP_102525395.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
VTAP4600_RS25095 (VTAP4600_B1775)	-	1808173..1810230 (-)	2058	WP_102525396.1	hybrid sensor histidine kinase/response regulator	-
VTAP4600_RS25100 (VTAP4600_B1776)	ltrA	1810418..1811701 (-)	1284	WP_102524786.1	group II intron reverse transcriptase/maturase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 43525.13 Da
• Isoelectric Point: 6.3542

>NTDB_id=1148331 VTAP4600_RS25090 WP_102525395.1 1806956..1808131(+) (cqsA) [Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600]
MNIENNHSKPLPSFISDRLDSYLDNHILCRKNAKHLVLGLEPDNTGIVLRSNDYLAVSNHPSIKQRQIDSIQNAEKEIVM
SAVFEQTEKSSNTFEYQLSEFTQFSQCIVAQSGWAANVGLLHTIASEDTPIYIDFYAHMSLWHGAQNANSPIYSFMHNKT
KHLQKLIDQHGPGIVIVDSVYSTVGTVSPLKDIVNIANESGCAVIVDESHSLGTHGPNGAGLLVELGLTEQVDFMTLSLA
KAFAYRAGAILCHSEMNRWLPYTSLPAIFSSAILPHEMETLKATLDLIKGRDKERTRLFEQSDKLRNGLRQLGYRIQSQS
QIVSIETGSEENTEVVRDYFEQHGLFGSVFCHPATPKNRSIIRLSVNSDITNRDIDHVLTVCSAAKSNNIT

Nucleotide

• Length: 1176 bp

>NTDB_id=1148331 VTAP4600_RS25090 WP_102525395.1 1806956..1808131(+) (cqsA) [Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600]
ATGAATATTGAAAATAACCATTCAAAACCTTTGCCTTCTTTTATTAGTGACAGGCTAGATTCCTATCTTGACAATCATAT
TTTGTGCCGGAAAAATGCCAAACATTTAGTGCTTGGACTTGAACCTGACAATACAGGTATCGTATTAAGAAGTAACGATT
ATCTGGCTGTGTCTAATCATCCATCAATCAAACAAAGACAAATAGATTCCATTCAAAATGCTGAAAAAGAAATCGTCATG
TCTGCCGTATTTGAACAAACGGAAAAGAGTTCTAATACCTTCGAATACCAATTGAGTGAATTCACTCAGTTTTCTCAGTG
CATCGTTGCTCAGTCAGGCTGGGCTGCAAACGTTGGCTTACTGCATACCATCGCTTCCGAAGACACGCCCATATATATCG
ACTTTTATGCCCATATGTCGTTGTGGCATGGCGCACAAAACGCGAACAGCCCAATCTACTCTTTCATGCATAACAAAACC
AAGCATCTACAGAAGCTGATCGATCAACATGGCCCAGGCATTGTCATCGTAGATTCCGTTTACAGCACCGTTGGCACTGT
TTCTCCACTTAAGGACATTGTAAACATTGCAAACGAAAGTGGCTGCGCAGTCATTGTTGATGAATCCCATTCATTAGGTA
CGCACGGTCCCAACGGAGCCGGTTTGCTGGTAGAGCTCGGTTTGACAGAACAAGTCGACTTCATGACCCTTAGTTTGGCC
AAAGCCTTCGCTTATCGTGCTGGTGCGATTTTGTGTCATTCAGAGATGAATCGTTGGCTACCATACACGTCTTTACCGGC
AATTTTCAGTTCAGCAATCTTGCCTCATGAAATGGAAACGTTAAAGGCAACACTCGACCTCATTAAAGGTCGCGATAAAG
AGCGAACACGCCTATTTGAACAGTCGGATAAACTGAGAAACGGATTAAGACAATTGGGGTATCGAATCCAGAGTCAGTCT
CAAATTGTGTCAATTGAAACCGGGAGTGAAGAAAATACAGAAGTCGTTCGAGATTATTTTGAGCAACACGGGTTATTTGG
TTCCGTCTTTTGTCATCCAGCAACACCAAAAAACCGGAGCATTATCAGGTTATCTGTGAACAGTGATATTACCAACAGAG
ACATTGATCATGTTTTAACGGTATGCAGCGCTGCAAAATCCAATAATATAACTTAA

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (47-379)

3D structure

• AlphaFold DB: A0A2N8ZN93

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	55.673	96.931	0.54