Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   V529_RS06635 Genome accession   NZ_CP006890
Coordinates   1371815..1372279 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis SQR9     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1366815..1377279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V529_RS06620 (V529_13320) - 1367296..1369116 (+) 1821 WP_038457846.1 PAS domain-containing protein -
  V529_RS06625 (V529_13330) - 1369141..1370310 (-) 1170 WP_007611083.1 aminotransferase A -
  V529_RS21060 (V529_13340) - 1370511..1370672 (-) 162 WP_193427903.1 hypothetical protein -
  V529_RS06630 (V529_13350) cheV 1370861..1371772 (+) 912 WP_038457848.1 chemotaxis protein CheV -
  V529_RS06635 (V529_13360) kre 1371815..1372279 (-) 465 WP_003154622.1 YkyB family protein Regulator
  V529_RS06640 (V529_13370) - 1372402..1373694 (-) 1293 WP_038457850.1 MFS transporter -
  V529_RS06645 (V529_13380) - 1373771..1374265 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  V529_RS06650 (V529_13390) - 1374340..1375203 (-) 864 WP_038457852.1 metallophosphoesterase -
  V529_RS06655 (V529_13400) fadH 1375347..1376111 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  V529_RS06660 - 1376232..1376723 (+) 492 WP_038457854.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=114831 V529_RS06635 WP_003154622.1 1371815..1372279(-) (kre) [Bacillus velezensis SQR9]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=114831 V529_RS06635 WP_003154622.1 1371815..1372279(-) (kre) [Bacillus velezensis SQR9]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment