Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | VTAP4600_RS00645 | Genome accession | NZ_LT960611 |
| Coordinates | 121105..121620 (+) | Length | 171 a.a. |
| NCBI ID | WP_102521026.1 | Uniprot ID | A0A2N8Z887 |
| Organism | Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 116105..126620
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VTAP4600_RS00635 (VTAP4600_A0115) | gshA | 118840..120408 (+) | 1569 | WP_102523841.1 | glutamate--cysteine ligase | - |
| VTAP4600_RS00640 (VTAP4600_A0116) | - | 120421..121032 (+) | 612 | WP_102521025.1 | hypothetical protein | - |
| VTAP4600_RS00645 (VTAP4600_A0117) | luxS | 121105..121620 (+) | 516 | WP_102521026.1 | S-ribosylhomocysteine lyase | Regulator |
| VTAP4600_RS00650 (VTAP4600_A0118) | - | 121812..122249 (-) | 438 | WP_102521027.1 | universal stress protein | - |
| VTAP4600_RS00655 (VTAP4600_A0119) | - | 122324..124903 (-) | 2580 | WP_102521028.1 | TRAP transporter permease | - |
| VTAP4600_RS00660 (VTAP4600_A0120) | - | 125129..126097 (-) | 969 | WP_102521029.1 | TAXI family TRAP transporter solute-binding subunit | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18827.64 Da Isoelectric Point: 4.8407
>NTDB_id=1148298 VTAP4600_RS00645 WP_102521026.1 121105..121620(+) (luxS) [Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600]
MPLLDSFTVDHTRMHAPAVRVAKTMQTPKGDTITVFDLRFCVPNKEILSENGIHTLEHLYAGFMRAHLNGSNVEIIDISP
MGCRTGFYMSLIGTPSEQQVADSWLAAMEDVLKVESQNKIPELNEYQCGTAGMHSLDEAKEIAQAIIAAGIAVNKNDELA
LPESMLKELKV
MPLLDSFTVDHTRMHAPAVRVAKTMQTPKGDTITVFDLRFCVPNKEILSENGIHTLEHLYAGFMRAHLNGSNVEIIDISP
MGCRTGFYMSLIGTPSEQQVADSWLAAMEDVLKVESQNKIPELNEYQCGTAGMHSLDEAKEIAQAIIAAGIAVNKNDELA
LPESMLKELKV
Nucleotide
Download Length: 516 bp
>NTDB_id=1148298 VTAP4600_RS00645 WP_102521026.1 121105..121620(+) (luxS) [Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600]
ATGCCACTATTAGATAGCTTTACCGTAGACCACACTCGAATGCATGCTCCTGCAGTACGTGTAGCAAAAACAATGCAAAC
TCCGAAAGGTGATACGATTACCGTATTTGACTTACGTTTTTGTGTACCAAACAAAGAGATTTTGTCTGAAAACGGCATTC
ACACACTCGAGCATCTTTATGCTGGGTTCATGCGAGCGCACCTAAATGGCAGTAACGTTGAAATCATCGATATTTCACCT
ATGGGATGTCGTACCGGATTTTATATGAGCCTGATCGGAACCCCTTCAGAACAGCAAGTTGCTGATTCTTGGTTAGCGGC
AATGGAAGATGTGCTTAAAGTTGAAAGCCAAAATAAAATTCCTGAGCTGAACGAATACCAATGTGGTACAGCAGGTATGC
ACTCGCTCGATGAAGCGAAAGAAATCGCACAAGCCATCATTGCGGCAGGCATTGCTGTAAACAAAAATGATGAACTAGCG
CTTCCTGAATCTATGCTGAAAGAGCTTAAGGTTTAA
ATGCCACTATTAGATAGCTTTACCGTAGACCACACTCGAATGCATGCTCCTGCAGTACGTGTAGCAAAAACAATGCAAAC
TCCGAAAGGTGATACGATTACCGTATTTGACTTACGTTTTTGTGTACCAAACAAAGAGATTTTGTCTGAAAACGGCATTC
ACACACTCGAGCATCTTTATGCTGGGTTCATGCGAGCGCACCTAAATGGCAGTAACGTTGAAATCATCGATATTTCACCT
ATGGGATGTCGTACCGGATTTTATATGAGCCTGATCGGAACCCCTTCAGAACAGCAAGTTGCTGATTCTTGGTTAGCGGC
AATGGAAGATGTGCTTAAAGTTGAAAGCCAAAATAAAATTCCTGAGCTGAACGAATACCAATGTGGTACAGCAGGTATGC
ACTCGCTCGATGAAGCGAAAGAAATCGCACAAGCCATCATTGCGGCAGGCATTGCTGTAAACAAAAATGATGAACTAGCG
CTTCCTGAATCTATGCTGAAAGAGCTTAAGGTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
86.55 |
100 |
0.866 |