Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   V529_RS05445 Genome accession   NZ_CP006890
Coordinates   1144937..1145128 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis SQR9     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139937..1150128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V529_RS05410 (V529_10720) argF 1140789..1141760 (+) 972 WP_038457606.1 ornithine carbamoyltransferase -
  V529_RS05415 (V529_10730) - 1141836..1142015 (+) 180 WP_003155070.1 YjzC family protein -
  V529_RS05420 (V529_10740) - 1142052..1142237 (-) 186 WP_007409129.1 YjzD family protein -
  V529_RS05430 (V529_10750) - 1142498..1143232 (+) 735 WP_038457610.1 hypothetical protein -
  V529_RS05435 (V529_10760) - 1143315..1143881 (+) 567 WP_038457612.1 hypothetical protein -
  V529_RS05440 (V529_10770) med 1143971..1144924 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  V529_RS05445 (V529_10780) comZ 1144937..1145128 (+) 192 WP_003155061.1 ComZ family protein Regulator
  V529_RS05450 (V529_10790) - 1145157..1145375 (-) 219 WP_007610579.1 hypothetical protein -
  V529_RS05455 (V529_10800) - 1145543..1146481 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  V529_RS05460 (V529_10810) fabF 1146503..1147741 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  V529_RS05465 (V529_10820) - 1147824..1148609 (+) 786 WP_029325951.1 DUF2268 domain-containing protein -
  V529_RS05470 (V529_10830) - 1148783..1149769 (+) 987 WP_038457614.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=114824 V529_RS05445 WP_003155061.1 1144937..1145128(+) (comZ) [Bacillus velezensis SQR9]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=114824 V529_RS05445 WP_003155061.1 1144937..1145128(+) (comZ) [Bacillus velezensis SQR9]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment