Detailed information NTG1147984

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CKV96_RS13830
• Genome accession: NZ_LT906476
• Coordinates: 3035625..3036692 (-)
• Length: 355 a.a.
• NCBI ID: WP_027220001.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain NCTC11286
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3030625..3041692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV96_RS13805 (SAMEA4040027_02714)	-	3030916..3031632 (-)	717	WP_013101922.1	dienelactone hydrolase family protein	-
CKV96_RS13810 (SAMEA4040027_02715)	-	3031914..3032780 (+)	867	WP_014844768.1	alpha/beta hydrolase	-
CKV96_RS13815 (SAMEA4040027_02716)	rpoH	3032915..3033769 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
CKV96_RS13820 (SAMEA4040027_02717)	ftsX	3034065..3034994 (-)	930	WP_014844769.1	permease-like cell division protein FtsX	-
CKV96_RS13825 (SAMEA4040027_02718)	ftsE	3034988..3035638 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
CKV96_RS13830 (SAMEA4040027_02719)	pilA	3035625..3036692 (-)	1068	WP_027220001.1	signal recognition particle-docking protein FtsY	Machinery gene
CKV96_RS13835 (SAMEA4040027_02720)	-	3036755..3038080 (+)	1326	WP_027220002.1	M16 family metallopeptidase	-
CKV96_RS13840 (SAMEA4040027_02721)	-	3038077..3039381 (+)	1305	WP_027220003.1	M16 family metallopeptidase	-
CKV96_RS13845 (SAMEA4040027_02722)	rsmD	3039378..3039923 (+)	546	WP_027220004.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CKV96_RS13850 (SAMEA4040027_02723)	dotD	3039998..3040489 (+)	492	WP_014842716.1	type IVB secretion system lipoprotein DotD	-
CKV96_RS13855 (SAMEA4040027_02724)	dotC	3040470..3041381 (+)	912	WP_011216545.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39017.52 Da
• Isoelectric Point: 5.6879

>NTDB_id=1147984 CKV96_RS13830 WP_027220001.1 3035625..3036692(-) (pilA) [Legionella pneumophila strain NCTC11286]
MIKWFKRNQNSEPNLDTEEQQDHAESSMESRLEEPQELTAKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=1147984 CKV96_RS13830 WP_027220001.1 3035625..3036692(-) (pilA) [Legionella pneumophila strain NCTC11286]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAACAAGATCATGCCGAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGCCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGCGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCAGACTCTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGTTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGT
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCTGCTGCGGTGGAGCAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCCGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (150-350)

• SRP54-type protein, helical bundle domain (SRP54_N) (64-130)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.063	89.014	0.49