Detailed information NTG1147932

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CKV77_RS04240
• Genome accession: NZ_LT906475
• Coordinates: 905464..906567 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain NCTC11014
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 900464..911567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV77_RS10315	-	901431..901571 (+)	141	WP_015345427.1	hypothetical protein	-
CKV77_RS04215 (SAMEA4063029_00854)	comF	901659..902312 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
CKV77_RS04225 (SAMEA4063029_00856)	-	902534..903085 (-)	552	WP_004918080.1	hypothetical protein	-
CKV77_RS04230 (SAMEA4063029_00857)	-	903140..903790 (-)	651	WP_004918082.1	HD domain-containing protein	-
CKV77_RS04235 (SAMEA4063029_00858)	gdhA	903922..905280 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
CKV77_RS04240 (SAMEA4063029_00859)	dprA	905464..906567 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
CKV77_RS04245 (SAMEA4063029_00860)	-	906570..906947 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
CKV77_RS04250 (SAMEA4063029_00861)	ruvC	906958..907512 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
CKV77_RS04255 (SAMEA4063029_00862)	-	907536..908726 (-)	1191	WP_004918090.1	carboxypeptidase-like regulatory domain-containing protein	-
CKV77_RS04260 (SAMEA4063029_00863)	-	908756..909229 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=1147932 CKV77_RS04240 WP_004918085.1 905464..906567(-) (dprA) [Riemerella anatipestifer strain NCTC11014]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=1147932 CKV77_RS04240 WP_004918085.1 905464..906567(-) (dprA) [Riemerella anatipestifer strain NCTC11014]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1