Detailed information NTG1147887

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CKV73_RS10530
• Genome accession: NZ_LT906472
• Coordinates: 1791667..1792920 (-)
• Length: 417 a.a.
• NCBI ID: WP_047921365.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NCTC13800
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1786667..1797920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV73_RS10495	-	1786845..1786970 (-)	126	Protein_1815	IS110 family transposase	-
CKV73_RS10500 (SAMEA4076768_01853)	-	1787506..1787913 (+)	408	Protein_1816	pilin	-
CKV73_RS10505 (SAMEA4076768_01854)	lpxC	1788415..1789338 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
CKV73_RS10510 (SAMEA4076768_01855)	-	1789467..1789871 (+)	405	Protein_1818	pilin	-
CKV73_RS14870	-	1790856..1791364 (+)	509	Protein_1819	pilin	-
CKV73_RS10530 (SAMEA4076768_01858)	pilA	1791667..1792920 (-)	1254	WP_047921365.1	signal recognition particle-docking protein FtsY	Machinery gene
CKV73_RS10540 (SAMEA4076768_01859)	msrAB	1793066..1794634 (+)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
CKV73_RS10545 (SAMEA4076768_01860)	-	1794718..1795203 (-)	486	WP_003687001.1	CinA family protein	-
CKV73_RS10550 (SAMEA4076768_01861)	-	1795229..1796077 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
CKV73_RS10555 (SAMEA4076768_01862)	-	1796171..1797172 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44431.78 Da
• Isoelectric Point: 4.7680

>NTDB_id=1147887 CKV73_RS10530 WP_047921365.1 1791667..1792920(-) (pilA) [Neisseria gonorrhoeae strain NCTC13800]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=1147887 CKV73_RS10530 WP_047921365.1 1791667..1792920(-) (pilA) [Neisseria gonorrhoeae strain NCTC13800]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGAACGCAACAATGTAACCGTCATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.281	100	0.993