Detailed information NTG1147863

Bioinformatically predicted

Overview

• Name: pilH
• Type: Machinery gene
• Locus tag: CKV73_RS03300
• Genome accession: NZ_LT906472
• Coordinates: 562430..563092 (+)
• Length: 220 a.a.
• NCBI ID: WP_047916986.1
• Uniprot ID: A0AA44U7R7
• Organism: Neisseria gonorrhoeae strain NCTC13800
• Function: type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 557430..568092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV73_RS03265 (SAMEA4076768_00557)	cysT	557607..558436 (-)	830	Protein_553	sulfate ABC transporter permease subunit CysT	-
CKV73_RS03270 (SAMEA4076768_00558)	-	558622..558954 (+)	333	WP_003687908.1	hypothetical protein	-
CKV73_RS03275 (SAMEA4076768_00559)	-	559284..559793 (+)	510	WP_003687909.1	isoprenylcysteine carboxyl methyltransferase family protein	-
CKV73_RS03285 (SAMEA4076768_00560)	-	560025..560606 (-)	582	WP_003690895.1	superoxide dismutase	-
CKV73_RS03295 (SAMEA4076768_00561)	dnaB	560770..562173 (+)	1404	WP_012503477.1	replicative DNA helicase	-
CKV73_RS15230	-	562167..562279 (-)	113	Protein_558	IS5/IS1182 family transposase	-
CKV73_RS03300 (SAMEA4076768_00562)	pilH	562430..563092 (+)	663	WP_047916986.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
CKV73_RS03305 (SAMEA4076768_00563)	pilI	563124..563738 (+)	615	WP_012503479.1	type IV pilus modification protein PilV	Machinery gene
CKV73_RS03310 (SAMEA4076768_00564)	pilJ	563735..564697 (+)	963	WP_047921846.1	PilW family protein	Machinery gene
CKV73_RS03315 (SAMEA4076768_00565)	pilK	564676..565284 (+)	609	WP_047921847.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
CKV73_RS03320 (SAMEA4076768_00566)	pilL	565286..565759 (+)	474	WP_012503482.1	PilX family type IV pilin	Machinery gene
CKV73_RS03325 (SAMEA4076768_00567)	-	565829..566137 (-)	309	WP_003706588.1	AzlD family protein	-
CKV73_RS03330	-	566134..566845 (-)	712	Protein_565	AzlC family ABC transporter permease	-
CKV73_RS03335 (SAMEA4076768_00570)	dut	567011..567463 (+)	453	WP_003701071.1	dUTP diphosphatase	-

Sequence

Protein

• Length: 220 a.a.
• Molecular weight: 24557.00 Da
• Isoelectric Point: 9.6166

>NTDB_id=1147863 CKV73_RS03300 WP_047916986.1 562430..563092(+) (pilH) [Neisseria gonorrhoeae strain NCTC13800]
MCTRKQQGFTLTELLIVMAIAAIMATIALPNMSGWIASRRIASHAEQVANLLRFSRGEAVRLNLPVYICPVQVKKDGASN
NRCDFSKKGWGMLAFGDKNDNKAYDGDATDVFLRSVVLNDTDDSRINYTFNHIAFGSSQPKADRVVWTFNQNGTFGYLPD
QNLKNNFKFVYSDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCRKNDTRAVCKH

Nucleotide

• Length: 663 bp

>NTDB_id=1147863 CKV73_RS03300 WP_047916986.1 562430..563092(+) (pilH) [Neisseria gonorrhoeae strain NCTC13800]
ATGTGTACACGAAAACAACAAGGTTTCACGCTAACAGAGCTGCTCATCGTGATGGCCATCGCAGCCATTATGGCGACGAT
AGCCCTCCCCAATATGAGTGGGTGGATTGCATCACGCCGCATTGCCAGTCACGCGGAGCAGGTTGCCAACCTTTTGCGTT
TCTCCAGGGGCGAAGCCGTCCGGCTCAATCTCCCTGTCTATATCTGTCCTGTTCAAGTTAAAAAAGACGGTGCGTCCAAC
AATAGATGTGACTTCAGCAAGAAGGGGTGGGGAATGTTGGCTTTCGGCGACAAAAACGACAATAAGGCATATGACGGCGA
TGCGACGGATGTTTTCCTCCGCAGCGTGGTGTTGAATGATACCGACGACAGCCGGATTAATTACACCTTCAATCATATCG
CTTTCGGTTCGTCTCAGCCGAAAGCCGACCGTGTAGTTTGGACTTTCAACCAAAACGGGACATTCGGCTATTTGCCCGAT
CAGAATCTCAAGAATAATTTCAAATTTGTTTATTCTGACGGTTATATCCAAATCGTGCTGACAGATGCGAGAGCAGTTTC
AGATGCCGATAAGAAATTCCGTTCGGCGGTGGTTTTGATTAACAGCAGCGGCAGGGTCGAAGTTTGTCGTAAAAACGATA
CGCGCGCCGTATGCAAACATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (4-29)

• Type II transport protein GspH (GspH) (44-204)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilH	Neisseria gonorrhoeae MS11	95.455	100	0.955