Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CKW05_RS12705 | Genome accession | NZ_LT906457 |
| Coordinates | 2799764..2800831 (-) | Length | 355 a.a. |
| NCBI ID | WP_058483136.1 | Uniprot ID | A0A0W0Z5I0 |
| Organism | Legionella spiritensis strain NCTC11990 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2794764..2805831
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKW05_RS12680 (SAMEA4412668_02535) | - | 2795452..2795637 (-) | 186 | WP_058483141.1 | CBU_0585 family protein | - |
| CKW05_RS12685 (SAMEA4412668_02536) | - | 2795736..2796716 (+) | 981 | WP_058483140.1 | adenosine deaminase | - |
| CKW05_RS12690 (SAMEA4412668_02537) | rpoH | 2797244..2798107 (-) | 864 | WP_058483139.1 | RNA polymerase sigma factor RpoH | - |
| CKW05_RS12695 (SAMEA4412668_02538) | ftsX | 2798198..2799127 (-) | 930 | WP_058483138.1 | permease-like cell division protein FtsX | - |
| CKW05_RS12700 (SAMEA4412668_02539) | ftsE | 2799121..2799771 (-) | 651 | WP_058483137.1 | cell division ATP-binding protein FtsE | - |
| CKW05_RS12705 (SAMEA4412668_02540) | pilA | 2799764..2800831 (-) | 1068 | WP_058483136.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| CKW05_RS12710 (SAMEA4412668_02541) | - | 2800893..2802218 (+) | 1326 | WP_058483135.1 | pitrilysin family protein | - |
| CKW05_RS12715 (SAMEA4412668_02542) | - | 2802215..2803519 (+) | 1305 | WP_058483134.1 | pitrilysin family protein | - |
| CKW05_RS12720 (SAMEA4412668_02543) | rsmD | 2803516..2804061 (+) | 546 | WP_058483133.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| CKW05_RS12725 (SAMEA4412668_02544) | dotD | 2804151..2804633 (+) | 483 | WP_058483132.1 | type IVB secretion system lipoprotein DotD | - |
| CKW05_RS12730 (SAMEA4412668_02545) | - | 2804614..2805531 (+) | 918 | WP_058483131.1 | type IV secretion system DotC family protein | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 38212.47 Da Isoelectric Point: 6.9303
>NTDB_id=1147584 CKW05_RS12705 WP_058483136.1 2799764..2800831(-) (pilA) [Legionella spiritensis strain NCTC11990]
MIKWFKRNQDANSSAPQSVEQESNGHLPVDETASVSTPVSDSSTERSKQGIYSRFKHGLTKTRHQLGEGLGRLLLGRKEI
DAALLEEVESLLLSADIGLEATQRIVQQLSDGLARRQLADGEAVIGSLKNHLQALLTEHGKPLIPQTADHSPFVILTVGV
NGAGKTTTIGKLARQFQSQGKKVMLAAGDTFRAAAIEQLQAWGERNKIPVIAQQTGADSASVIFDALQAAKARGIDILIA
DTAGRLHTQGNLMEELKKVKRVIKKLDADAPHETMLVLDASIGQNALNQAREFNQAVGVTGITMTKLDGTAKGGILFAIA
NELGIPFRYLGIGEGIDDLRPFDAAQFVRAIFNDD
MIKWFKRNQDANSSAPQSVEQESNGHLPVDETASVSTPVSDSSTERSKQGIYSRFKHGLTKTRHQLGEGLGRLLLGRKEI
DAALLEEVESLLLSADIGLEATQRIVQQLSDGLARRQLADGEAVIGSLKNHLQALLTEHGKPLIPQTADHSPFVILTVGV
NGAGKTTTIGKLARQFQSQGKKVMLAAGDTFRAAAIEQLQAWGERNKIPVIAQQTGADSASVIFDALQAAKARGIDILIA
DTAGRLHTQGNLMEELKKVKRVIKKLDADAPHETMLVLDASIGQNALNQAREFNQAVGVTGITMTKLDGTAKGGILFAIA
NELGIPFRYLGIGEGIDDLRPFDAAQFVRAIFNDD
Nucleotide
Download Length: 1068 bp
>NTDB_id=1147584 CKW05_RS12705 WP_058483136.1 2799764..2800831(-) (pilA) [Legionella spiritensis strain NCTC11990]
ATGATTAAATGGTTTAAAAGAAATCAGGATGCTAACAGTTCAGCTCCCCAATCTGTGGAGCAGGAATCGAATGGACACTT
GCCGGTTGATGAAACAGCGTCCGTTTCGACGCCGGTTTCCGATTCTTCCACAGAGCGGAGTAAGCAGGGGATTTACAGTC
GATTCAAGCATGGACTGACCAAAACACGCCACCAGCTGGGCGAAGGGTTAGGGCGTCTGTTACTGGGGCGGAAGGAAATT
GACGCGGCCTTGCTGGAAGAGGTTGAATCGTTACTCTTGAGTGCCGATATCGGCCTTGAGGCGACCCAAAGAATAGTACA
GCAACTTAGTGACGGTCTGGCACGTCGTCAATTAGCGGATGGCGAGGCGGTTATCGGTTCGTTAAAAAACCACTTGCAGG
CTTTGCTGACCGAACATGGCAAACCTTTAATTCCCCAAACGGCTGATCATTCTCCGTTTGTTATTTTAACCGTAGGCGTC
AATGGTGCCGGGAAAACGACCACCATCGGCAAATTGGCCAGACAGTTTCAATCACAAGGCAAGAAAGTGATGCTGGCTGC
CGGCGACACGTTTCGCGCCGCGGCAATCGAGCAGCTCCAGGCCTGGGGCGAGCGCAACAAGATACCTGTTATTGCCCAGC
AAACAGGTGCCGACAGCGCTTCGGTGATATTTGACGCGTTACAAGCCGCCAAAGCACGGGGGATTGATATACTTATCGCT
GATACGGCGGGCCGCTTGCATACCCAGGGTAATTTGATGGAAGAGTTGAAAAAAGTGAAGCGGGTTATTAAGAAACTCGA
CGCCGACGCGCCGCATGAAACGATGCTGGTTCTGGATGCCAGTATAGGACAAAACGCATTGAATCAGGCGCGTGAATTCA
ATCAGGCTGTCGGTGTAACCGGCATAACCATGACAAAACTCGATGGAACGGCCAAGGGCGGTATTTTATTTGCCATAGCC
AATGAATTAGGGATACCATTTCGTTATCTAGGGATTGGAGAAGGGATTGATGATTTGCGCCCCTTCGATGCGGCACAATT
TGTCAGGGCGATTTTTAACGATGATTGA
ATGATTAAATGGTTTAAAAGAAATCAGGATGCTAACAGTTCAGCTCCCCAATCTGTGGAGCAGGAATCGAATGGACACTT
GCCGGTTGATGAAACAGCGTCCGTTTCGACGCCGGTTTCCGATTCTTCCACAGAGCGGAGTAAGCAGGGGATTTACAGTC
GATTCAAGCATGGACTGACCAAAACACGCCACCAGCTGGGCGAAGGGTTAGGGCGTCTGTTACTGGGGCGGAAGGAAATT
GACGCGGCCTTGCTGGAAGAGGTTGAATCGTTACTCTTGAGTGCCGATATCGGCCTTGAGGCGACCCAAAGAATAGTACA
GCAACTTAGTGACGGTCTGGCACGTCGTCAATTAGCGGATGGCGAGGCGGTTATCGGTTCGTTAAAAAACCACTTGCAGG
CTTTGCTGACCGAACATGGCAAACCTTTAATTCCCCAAACGGCTGATCATTCTCCGTTTGTTATTTTAACCGTAGGCGTC
AATGGTGCCGGGAAAACGACCACCATCGGCAAATTGGCCAGACAGTTTCAATCACAAGGCAAGAAAGTGATGCTGGCTGC
CGGCGACACGTTTCGCGCCGCGGCAATCGAGCAGCTCCAGGCCTGGGGCGAGCGCAACAAGATACCTGTTATTGCCCAGC
AAACAGGTGCCGACAGCGCTTCGGTGATATTTGACGCGTTACAAGCCGCCAAAGCACGGGGGATTGATATACTTATCGCT
GATACGGCGGGCCGCTTGCATACCCAGGGTAATTTGATGGAAGAGTTGAAAAAAGTGAAGCGGGTTATTAAGAAACTCGA
CGCCGACGCGCCGCATGAAACGATGCTGGTTCTGGATGCCAGTATAGGACAAAACGCATTGAATCAGGCGCGTGAATTCA
ATCAGGCTGTCGGTGTAACCGGCATAACCATGACAAAACTCGATGGAACGGCCAAGGGCGGTATTTTATTTGCCATAGCC
AATGAATTAGGGATACCATTTCGTTATCTAGGGATTGGAGAAGGGATTGATGATTTGCGCCCCTTCGATGCGGCACAATT
TGTCAGGGCGATTTTTAACGATGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
55.591 |
88.169 |
0.49 |