Detailed information NTG1147488

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: CKV85_RS07610
• Genome accession: NZ_LT906454
• Coordinates: 1557404..1558282 (-)
• Length: 292 a.a.
• NCBI ID: WP_095123110.1
• Uniprot ID: -
• Organism: Streptococcus acidominimus strain NCTC11291
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1552404..1563282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV85_RS07590 (SAMEA4504048_01617)	-	1552415..1552792 (-)	378	WP_095123104.1	OsmC family protein	-
CKV85_RS07595 (SAMEA4504048_01618)	pheT	1552847..1555252 (-)	2406	WP_095123106.1	phenylalanine--tRNA ligase subunit beta	-
CKV85_RS07600 (SAMEA4504048_01619)	-	1555408..1555932 (-)	525	WP_172843178.1	GNAT family N-acetyltransferase	-
CKV85_RS07605 (SAMEA4504048_01620)	pheS	1555941..1556981 (-)	1041	WP_017768661.1	phenylalanine--tRNA ligase subunit alpha	-
CKV85_RS07610 (SAMEA4504048_01622)	endA	1557404..1558282 (-)	879	WP_095123110.1	DNA/RNA non-specific endonuclease	Machinery gene
CKV85_RS07615 (SAMEA4504048_01623)	-	1558316..1558504 (-)	189	WP_017768663.1	DNA-directed RNA polymerase subunit beta	-
CKV85_RS07620 (SAMEA4504048_01624)	murA	1558506..1559774 (-)	1269	WP_095123112.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
CKV85_RS07625 (SAMEA4504048_01625)	-	1559810..1560043 (-)	234	WP_037563438.1	DUF1146 family protein	-
CKV85_RS07630 (SAMEA4504048_01626)	-	1560609..1561025 (-)	417	WP_017770514.1	F0F1 ATP synthase subunit epsilon	-
CKV85_RS07635 (SAMEA4504048_01627)	atpD	1561038..1562444 (-)	1407	WP_095123114.1	F0F1 ATP synthase subunit beta	-

Sequence

Protein

• Length: 292 a.a.
• Molecular weight: 31746.14 Da
• Isoelectric Point: 8.3112

>NTDB_id=1147488 CKV85_RS07610 WP_095123110.1 1557404..1558282(-) (endA) [Streptococcus acidominimus strain NCTC11291]
MPKKYYSKRKTTSLVSALAVIIPIALGLIAGSDHLSDSNPLKQIASVITNNKADQIVSNGSTSHEDTPSQRLAESVLTDQ
VRKQLGNDIQWNGSGAFIINGNKTGIDAQVSSMPYVDNQTKRVQGAVVPTVANALLSKESRQYRDRDSTGNGSTAWKPAG
WHQIHDLPGEYDHAIDRGHLIGYALAGSIKGFDPSASNPQNIAVQTAWSNQANDSYSTGQNYYETQVRRALDNNKRVRYR
VTLIYDGDNIIASGSHLEAKSSDGNLEFNVFVPNVQSGLTINYANGKIQVND

Nucleotide

• Length: 879 bp

>NTDB_id=1147488 CKV85_RS07610 WP_095123110.1 1557404..1558282(-) (endA) [Streptococcus acidominimus strain NCTC11291]
ATGCCTAAAAAATATTATTCAAAAAGAAAAACGACATCATTAGTATCGGCACTTGCTGTTATCATCCCTATCGCTTTAGG
CTTGATTGCAGGTAGTGATCATCTTTCTGATTCCAATCCCCTGAAACAGATTGCTAGCGTTATTACTAATAATAAGGCTG
ATCAAATCGTTTCCAATGGATCAACTAGCCATGAAGATACACCGAGCCAAAGGTTGGCAGAGTCGGTTTTAACCGATCAG
GTCAGGAAGCAATTGGGTAATGATATCCAATGGAATGGATCTGGTGCTTTTATTATTAATGGTAATAAGACGGGAATAGA
TGCCCAAGTGTCAAGTATGCCATATGTGGATAACCAAACTAAGCGGGTACAGGGAGCAGTAGTGCCGACGGTAGCTAACG
CGCTTTTGTCTAAGGAGAGTCGTCAGTATCGCGATCGTGACTCAACTGGTAATGGTTCAACTGCTTGGAAGCCAGCAGGA
TGGCATCAAATTCACGATTTACCAGGAGAATACGACCATGCCATTGACCGTGGTCATCTGATTGGTTATGCCCTTGCAGG
TAGTATTAAAGGATTTGATCCTTCAGCCAGTAATCCCCAAAATATCGCTGTGCAAACAGCTTGGTCAAATCAAGCCAATG
ACAGCTATTCTACGGGTCAAAACTATTATGAAACACAAGTTCGCCGAGCCTTGGATAATAACAAACGCGTGCGTTATCGT
GTAACCCTCATTTACGATGGGGATAACATCATCGCCTCAGGCTCGCACTTGGAAGCAAAATCGAGTGATGGTAATCTGGA
ATTTAACGTTTTTGTGCCGAACGTACAAAGTGGGTTGACCATTAATTATGCTAACGGGAAAATCCAAGTAAATGATTAG

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (94-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	65.044	77.397	0.503
endA	Streptococcus pneumoniae D39	65.044	77.397	0.503
endA	Streptococcus pneumoniae R6	65.044	77.397	0.503
endA	Streptococcus pneumoniae TIGR4	65.044	77.397	0.503