Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | CKV84_RS03465 | Genome accession | NZ_LT906452 |
| Coordinates | 702642..703349 (-) | Length | 235 a.a. |
| NCBI ID | WP_027220492.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain NCTC11985 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 697642..708349
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV84_RS03450 (SAMEA4040028_00674) | - | 700517..701029 (-) | 513 | WP_027220490.1 | pilus assembly protein | - |
| CKV84_RS03455 (SAMEA4040028_00675) | - | 701026..702093 (-) | 1068 | WP_027220491.1 | PilW family protein | - |
| CKV84_RS03460 (SAMEA4040028_00676) | pilV | 702090..702629 (-) | 540 | WP_011945793.1 | type IV pilus modification protein PilV | - |
| CKV84_RS03465 (SAMEA4040028_00677) | fimT | 702642..703349 (-) | 708 | WP_027220492.1 | GspH/FimT family pseudopilin | Machinery gene |
| CKV84_RS03470 (SAMEA4040028_00678) | - | 703570..704430 (-) | 861 | WP_027220493.1 | polysaccharide deacetylase family protein | - |
| CKV84_RS03475 (SAMEA4040028_00679) | - | 704607..705956 (-) | 1350 | WP_080275573.1 | lpg0634 family Dot/Icm T4SS effector | - |
| CKV84_RS03480 (SAMEA4040028_00680) | - | 706246..707727 (+) | 1482 | WP_027220495.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24908.58 Da Isoelectric Point: 7.9461
>NTDB_id=1147422 CKV84_RS03465 WP_027220492.1 702642..703349(-) (fimT) [Legionella pneumophila strain NCTC11985]
MNKVVTESQKFTLRNVANMLFCVESSVLPAQSNIAQKIQKKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGGNWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVVTESQKFTLRNVANMLFCVESSVLPAQSNIAQKIQKKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGGNWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1147422 CKV84_RS03465 WP_027220492.1 702642..703349(-) (fimT) [Legionella pneumophila strain NCTC11985]
TTGAACAAAGTGGTAACGGAATCACAAAAGTTCACTCTGCGCAACGTAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
GTTACCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACCGAAGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACTCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCACGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGGCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGTTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGGTAACGGAATCACAAAAGTTCACTCTGCGCAACGTAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
GTTACCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACCGAAGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACTCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCACGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGGCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGTTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
97.021 |
100 |
0.97 |