Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | CKV84_RS00765 | Genome accession | NZ_LT906452 |
| Coordinates | 162463..163155 (+) | Length | 230 a.a. |
| NCBI ID | WP_014840779.1 | Uniprot ID | A0AAV2UT33 |
| Organism | Legionella pneumophila strain NCTC11985 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 157463..168155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV84_RS00745 (SAMEA4040028_00145) | dapB | 160003..160734 (-) | 732 | WP_014840776.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| CKV84_RS00750 | - | 160913..161098 (-) | 186 | WP_011212782.1 | hypothetical protein | - |
| CKV84_RS00755 (SAMEA4040028_00146) | - | 161406..161864 (+) | 459 | Protein_140 | hypothetical protein | - |
| CKV84_RS00760 (SAMEA4040028_00147) | - | 161890..162182 (+) | 293 | Protein_141 | GIY-YIG nuclease family protein | - |
| CKV84_RS00765 (SAMEA4040028_00148) | rocC | 162463..163155 (+) | 693 | WP_014840779.1 | ProQ/FinO family protein | Regulator |
| CKV84_RS00770 (SAMEA4040028_00149) | - | 163156..164226 (+) | 1071 | WP_014840780.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 230 a.a. Molecular weight: 25838.72 Da Isoelectric Point: 10.6807
>NTDB_id=1147417 CKV84_RS00765 WP_014840779.1 162463..163155(+) (rocC) [Legionella pneumophila strain NCTC11985]
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGVSKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSYVNNQPSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETTE
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGVSKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSYVNNQPSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETTE
Nucleotide
Download Length: 693 bp
>NTDB_id=1147417 CKV84_RS00765 WP_014840779.1 162463..163155(+) (rocC) [Legionella pneumophila strain NCTC11985]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGCGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAGTTTCTAAAAGCAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATCGATTTGCACGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCACGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCATATGTAAATAATCAGCCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCGGAAGAGAAAAAGGAAACAACAGAGTAA
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGCGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAGTTTCTAAAAGCAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATCGATTTGCACGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCACGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCATATGTAAATAATCAGCCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCGGAAGAGAAAAAGGAAACAACAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
98.696 |
100 |
0.987 |