Detailed information NTG1147283

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: CKV90_RS07750
• Genome accession: NZ_LT906444
• Coordinates: 1517074..1519470 (-)
• Length: 798 a.a.
• NCBI ID: WP_011702312.1
• Uniprot ID: -
• Organism: Listeria welshimeri strain NCTC11857
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1512074..1524470

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV90_RS07730 (SAMEA4534872_01579)	-	1512552..1513247 (-)	696	WP_011702308.1	ABC transporter ATP-binding protein	-
CKV90_RS07735 (SAMEA4534872_01580)	-	1513256..1514755 (-)	1500	WP_011702309.1	ABC transporter permease	-
CKV90_RS07740 (SAMEA4534872_01581)	pieR	1514922..1515608 (+)	687	WP_011702310.1	two component system response regulator PieR	-
CKV90_RS07745 (SAMEA4534872_01582)	pieS	1515605..1517044 (+)	1440	WP_011702311.1	two component system sensor histidine kinase PieS	-
CKV90_RS07750 (SAMEA4534872_01583)	recD2	1517074..1519470 (-)	2397	WP_011702312.1	ATP-dependent RecD-like DNA helicase	Machinery gene
CKV90_RS07755 (SAMEA4534872_01584)	-	1519493..1520131 (-)	639	WP_077904745.1	tetratricopeptide repeat protein	-
CKV90_RS07760 (SAMEA4534872_01585)	-	1520175..1520915 (-)	741	WP_011702314.1	alpha/beta hydrolase	-
CKV90_RS07765 (SAMEA4534872_01586)	mnmA	1521032..1522147 (-)	1116	WP_011702315.1	tRNA 2-thiouridine(34) synthase MnmA	-
CKV90_RS07770 (SAMEA4534872_01587)	-	1522166..1523314 (-)	1149	WP_011702316.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90218.39 Da
• Isoelectric Point: 4.8174

>NTDB_id=1147283 CKV90_RS07750 WP_011702312.1 1517074..1519470(-) (recD2) [Listeria welshimeri strain NCTC11857]
MAEQESLALFDDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQVYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGVLFML
DSVCMQQGHVYMEKEVLLGEVTYLLEESEGIRIDQAILLQQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGDSQREALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGLSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILHSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPTDFAKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGEIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLMSEDVMLEQMTNKRILTTENITEIDPMIGMEGITPEQFMVG

Nucleotide

• Length: 2397 bp

>NTDB_id=1147283 CKV90_RS07750 WP_011702312.1 1517074..1519470(-) (recD2) [Listeria welshimeri strain NCTC11857]
ATGGCAGAACAAGAATCTCTTGCCTTATTTGACGATACACCAGAAGAACTTTTTATGAAAGGCACGATGCTGTCTACCAT
TTTTTATAATGCCGAAAACCTCTTTTCTGTGGTACGGATTTTAGTTAAAGAAACCAATGCGGACTGGGATGAAAAAGACA
TTATTGTGACTGGTTTTTTTCCTGCGCTTCATGAACAAGAAGTATATACTTTTTATGGGAAAATGCAGGAACATGCTAAA
TTTGGTCAACAGTTTAAAGCAGATAGATTTCGAAAAGAAATGCCTCAATCTCGTGCCGGATTAATTAATTATCTTTCTGG
TGAACTTTTTAAAGGAATTGGCAAGGTCACAGCAGAAAATATTGTTGACACAATTGGTGATGATGCTATTACAAAAATAT
TATCAGATCCAAGTTTACTAAATACTGTTCCCAAATTGCCATCAGGTGCTGCGGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAAGGTCTAGAACATGTCATGGTTGGTTTGAATGAATACGGTTTTGGTCCGCAATTATCAATGAAAATTTTTCAAGT
ATATAAACAAAATGCTATTGAAGTTTTAGAAAATAATCCGTATAAGCTAATTGAAGATGTAAAAGGGATCGGATTTCAGC
GTGCCGATGAGCTTGGACGAAAACTGGGGCTCGGTGGGAATCATCCAGAACGCCTTCGTGCAGGTGTTTTATTTATGCTA
GATTCTGTTTGTATGCAACAAGGTCATGTGTATATGGAAAAAGAGGTTTTGCTTGGTGAAGTAACTTATTTGCTTGAAGA
AAGTGAAGGCATCAGGATTGACCAAGCTATTTTATTACAACAAGTGGAAAAGCTCGCAGAAGAACAAAAAATCATCACTG
AAAATACTCGTGTATACATGCCGTCACTATACTATTCAGAAAGCGGTTTTGCTTATCATGTAAAACGGATGTTAAAGCAA
ACCGAATATCAAGAACAATTTCCGCAATCTGAGTTTTTATTAGCACTTGGAGAATTGGAAGAACGTATTGGAGTACATTA
CGGAGATTCTCAGCGTGAAGCGTTAGAACAAGCACTAATGTCGCCAATGTTAGTTTTGACTGGTGGACCTGGTACTGGGA
AAACAACTGTTATAAAAGGGATTGTGGAACTCTACGCGGAATTAAATGGCCTAAGCCTTGATCCGCACGCGTATAAAGAT
GGTGCTACTTTTCCAGTGTTACTTGCTGCGCCAACAGGTCGGGCAGCTAAACGGATGTCTGAATCTACCGGTCTTCCAGC
AATGACCATTCACCGTTTACTTGGAATGAATGGACAAGAACAAATGGATGACGATGCCGAAAGATTAATTGATGGTCGGC
TTTTAATTGTAGATGAAATGTCAATGGTTGATATTTGGCTTGCGAATCAATTATTCCGAGCCTTACCAGCTCATATGCAA
GTAGTACTAGTTGGCGACCAAGACCAGCTTCCATCAGTTGGACCTGGCCAAGTTTTGAAAGATATTCTACATTCAGAGCA
AATTCCAACTGTCGCTCTCTCAGATATTTATCGTCAAAAAGATGGTTCATCCATTATTGAAATGGCCCATTATATTAAAG
AAGGGATGCTACCAACTGATTTTGCGAAAAATAGTGCAGATCGCTCGTTTTTCCACTGTACAGTAAACCAGATTGGGGAT
GTAGTTGAACAAGTCGTAAAAAATGCTAAAAATAAAGGTTTCCGCGCAAAAGATATTCAAGTGTTAGCACCGATGTATCG
CGGACCAGCAGGAATTGATATTTTAAATAAAAAGTTGCAAGAAATTTTCAATCCTAATGATACCGGCCGCCGCAAAGAAG
TACAATTCGGGGAAATTAAGTATCGGGTTCACGACAAGGTACTGCAATTAATTAATCAACCTGAAAAGAACGTTTTTAAC
GGGGATATTGGTGAAATAGTTTCGATAATCTATGCGAAAGAAAATACTGAAAAACAAGATTTGATTGTGGTTCAATTTGA
TCAAACGGAGGTTTCTTATTACAGACAAGAATTTAATCAATTAACCCATGCTTATTGTTGTTCGATTCATAAAGCCCAAG
GGAGCGAGTTTCCAATTGTGATTATGCCAATTGTGCGCAGTTATTATCGAATGTTACGCCGTGATTTACTTTATACAGGA
GTGACAAGAAGTAAACAATTCCTTATCCTGTGCGGAGAAGAAGAAGCTTTTCGAATGGGCGTAGAGCGTGTGGATGAAAA
CAAACGAAATACAACCCTCTCTGAACGTTTAATGAGCGAAGATGTAATGCTAGAACAAATGACGAATAAACGCATATTAA
CGACGGAAAATATTACAGAAATTGATCCTATGATTGGAATGGAAGGGATTACCCCAGAACAATTTATGGTAGGATGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (347-554)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	56.98	98.747	0.563