Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CKW04_RS15520 | Genome accession | NZ_LT906442 |
| Coordinates | 3358562..3359629 (-) | Length | 355 a.a. |
| NCBI ID | WP_058480053.1 | Uniprot ID | A0A0W1AD69 |
| Organism | Legionella waltersii strain NCTC13017 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3353562..3364629
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKW04_RS15495 (SAMEA4504053_03170) | - | 3353974..3355143 (+) | 1170 | WP_133141230.1 | hypothetical protein | - |
| CKW04_RS15500 (SAMEA4504053_03171) | - | 3355204..3356070 (+) | 867 | WP_058480050.1 | alpha/beta hydrolase | - |
| CKW04_RS15505 (SAMEA4504053_03172) | rpoH | 3356075..3356929 (-) | 855 | WP_058480051.1 | RNA polymerase sigma factor RpoH | - |
| CKW04_RS15510 (SAMEA4504053_03173) | ftsX | 3357002..3357931 (-) | 930 | WP_058480052.1 | permease-like cell division protein FtsX | - |
| CKW04_RS15515 (SAMEA4504053_03174) | ftsE | 3357925..3358575 (-) | 651 | WP_058480212.1 | cell division ATP-binding protein FtsE | - |
| CKW04_RS15520 (SAMEA4504053_03175) | pilA | 3358562..3359629 (-) | 1068 | WP_058480053.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| CKW04_RS15525 (SAMEA4504053_03176) | - | 3359815..3361143 (+) | 1329 | WP_408607295.1 | M16 family metallopeptidase | - |
| CKW04_RS15530 (SAMEA4504053_03177) | - | 3361140..3362444 (+) | 1305 | WP_058480054.1 | pitrilysin family protein | - |
| CKW04_RS15535 (SAMEA4504053_03178) | rsmD | 3362441..3362986 (+) | 546 | WP_058480055.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| CKW04_RS15540 (SAMEA4504053_03179) | dotD | 3363059..3363544 (+) | 486 | WP_058480056.1 | type IVB secretion system lipoprotein DotD | - |
| CKW04_RS15545 (SAMEA4504053_03180) | - | 3363525..3364439 (+) | 915 | WP_058480057.1 | type IV secretion system DotC family protein | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 38814.36 Da Isoelectric Point: 6.0074
>NTDB_id=1147252 CKW04_RS15520 WP_058480053.1 3358562..3359629(-) (pilA) [Legionella waltersii strain NCTC13017]
MIKWFKRNQNSDENSVDASKNASPDLANDHSSFSVEDIPSTEIKTKEGLFARFKKGLSKTRHQLGEGIGRLLLGKKEINP
ALLDELETMLISADVGLDTSQALLKQLNEELERKQLADGEALYNALRTNLFEVLKNAEKPLAIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVVAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQNNLMEELKKVKRVIQKLDPKAPHETMLVLDASIGQNALSQARQFNEAVQLSGITMTKLDGTAKGGILFAIANE
LKIPFRYLGVGEGIEDLRPFEAAQFVSAIFDDDHI
MIKWFKRNQNSDENSVDASKNASPDLANDHSSFSVEDIPSTEIKTKEGLFARFKKGLSKTRHQLGEGIGRLLLGKKEINP
ALLDELETMLISADVGLDTSQALLKQLNEELERKQLADGEALYNALRTNLFEVLKNAEKPLAIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVVAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQNNLMEELKKVKRVIQKLDPKAPHETMLVLDASIGQNALSQARQFNEAVQLSGITMTKLDGTAKGGILFAIANE
LKIPFRYLGVGEGIEDLRPFEAAQFVSAIFDDDHI
Nucleotide
Download Length: 1068 bp
>NTDB_id=1147252 CKW04_RS15520 WP_058480053.1 3358562..3359629(-) (pilA) [Legionella waltersii strain NCTC13017]
ATGATCAAATGGTTTAAACGAAATCAAAATTCCGATGAAAATTCCGTAGATGCATCGAAAAATGCCAGCCCAGATCTAGC
AAATGATCACTCATCATTCAGTGTTGAAGACATCCCGAGTACTGAGATTAAAACCAAAGAAGGCCTTTTTGCTCGATTTA
AAAAGGGATTAAGTAAAACCCGCCATCAGTTGGGTGAGGGAATTGGGCGTTTGCTTTTAGGTAAAAAGGAGATAAACCCA
GCTTTGCTTGATGAGCTTGAAACAATGCTGATCAGCGCTGATGTTGGGTTAGACACTAGCCAGGCTCTGTTAAAACAACT
CAACGAAGAGCTGGAAAGAAAGCAATTGGCGGATGGCGAGGCGCTCTATAACGCCTTGAGGACTAATTTATTTGAGGTTT
TAAAAAACGCGGAAAAGCCGTTAGCCATTGAAACGGAAGACGGTTCTCCCTTTGTCATTTTAATGGTTGGGGTCAATGGT
GCTGGAAAAACCACTACCATTGGAAAACTGGCTAAACAGTTTCAACAGCAAGGAAAAAAAGTGATGTTGGCTGCTGGAGA
TACTTTCCGGGCGGCTGCGGTGGAACAATTGCAAGTTTGGGGTGAGCGCAACCAGATCCCAGTAGTGGCTCAGCATACTG
GCGCGGATAGTGCTTCGGTGATTTTTGATGCGTTACAAGCAGCAAAAGCACGGAAAATCGATGTATTGATAGCCGACACT
GCTGGGCGATTGCATACCCAAAACAATTTAATGGAAGAGTTGAAAAAGGTTAAACGAGTTATTCAAAAACTTGATCCCAA
GGCACCTCATGAAACAATGCTTGTGCTTGATGCCAGTATTGGTCAGAATGCTTTGTCTCAAGCAAGACAGTTTAATGAAG
CAGTACAATTGTCAGGAATCACCATGACGAAGCTTGATGGAACAGCCAAAGGCGGGATATTATTTGCAATAGCAAATGAA
CTAAAAATACCGTTTCGTTATTTAGGTGTGGGTGAGGGCATAGAGGATTTAAGGCCCTTTGAAGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCATATTTGA
ATGATCAAATGGTTTAAACGAAATCAAAATTCCGATGAAAATTCCGTAGATGCATCGAAAAATGCCAGCCCAGATCTAGC
AAATGATCACTCATCATTCAGTGTTGAAGACATCCCGAGTACTGAGATTAAAACCAAAGAAGGCCTTTTTGCTCGATTTA
AAAAGGGATTAAGTAAAACCCGCCATCAGTTGGGTGAGGGAATTGGGCGTTTGCTTTTAGGTAAAAAGGAGATAAACCCA
GCTTTGCTTGATGAGCTTGAAACAATGCTGATCAGCGCTGATGTTGGGTTAGACACTAGCCAGGCTCTGTTAAAACAACT
CAACGAAGAGCTGGAAAGAAAGCAATTGGCGGATGGCGAGGCGCTCTATAACGCCTTGAGGACTAATTTATTTGAGGTTT
TAAAAAACGCGGAAAAGCCGTTAGCCATTGAAACGGAAGACGGTTCTCCCTTTGTCATTTTAATGGTTGGGGTCAATGGT
GCTGGAAAAACCACTACCATTGGAAAACTGGCTAAACAGTTTCAACAGCAAGGAAAAAAAGTGATGTTGGCTGCTGGAGA
TACTTTCCGGGCGGCTGCGGTGGAACAATTGCAAGTTTGGGGTGAGCGCAACCAGATCCCAGTAGTGGCTCAGCATACTG
GCGCGGATAGTGCTTCGGTGATTTTTGATGCGTTACAAGCAGCAAAAGCACGGAAAATCGATGTATTGATAGCCGACACT
GCTGGGCGATTGCATACCCAAAACAATTTAATGGAAGAGTTGAAAAAGGTTAAACGAGTTATTCAAAAACTTGATCCCAA
GGCACCTCATGAAACAATGCTTGTGCTTGATGCCAGTATTGGTCAGAATGCTTTGTCTCAAGCAAGACAGTTTAATGAAG
CAGTACAATTGTCAGGAATCACCATGACGAAGCTTGATGGAACAGCCAAAGGCGGGATATTATTTGCAATAGCAAATGAA
CTAAAAATACCGTTTCGTTATTTAGGTGTGGGTGAGGGCATAGAGGATTTAAGGCCCTTTGAAGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCATATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.679 |
94.648 |
0.499 |