Detailed information NTG1147224

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: CKW04_RS04735
• Genome accession: NZ_LT906442
• Coordinates: 976498..977160 (-)
• Length: 220 a.a.
• NCBI ID: WP_095197492.1
• Uniprot ID: -
• Organism: Legionella waltersii strain NCTC13017
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 971498..982160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKW04_RS04720 (SAMEA4504053_00962)	-	974374..974883 (-)	510	WP_058481383.1	pilus assembly protein	-
CKW04_RS04725 (SAMEA4504053_00963)	-	974880..975947 (-)	1068	WP_058481384.1	PilW family protein	-
CKW04_RS04730 (SAMEA4504053_00964)	pilV	975944..976483 (-)	540	WP_058481385.1	type IV pilus modification protein PilV	-
CKW04_RS04735 (SAMEA4504053_00965)	fimT	976498..977160 (-)	663	WP_095197492.1	GspH/FimT family pseudopilin	Machinery gene
CKW04_RS04740 (SAMEA4504053_00966)	-	977296..978165 (-)	870	WP_058481386.1	polysaccharide deacetylase family protein	-
CKW04_RS04745 (SAMEA4504053_00967)	-	978320..979627 (-)	1308	WP_058481387.1	hypothetical protein	-
CKW04_RS04750 (SAMEA4504053_00968)	-	979918..981399 (+)	1482	WP_058481388.1	glycosyltransferase family 39 protein	-

Sequence

Protein

• Length: 220 a.a.
• Molecular weight: 23603.77 Da
• Isoelectric Point: 5.9525

>NTDB_id=1147224 CKW04_RS04735 WP_095197492.1 976498..977160(-) (fimT) [Legionella waltersii strain NCTC13017]
MNSSLLCMDENMVFSEGHVVHSTQFERMGDCYTPGKVRLQKISNPTVFEVFTGFTLIELLVTLTVFAIILTLIVPSLQTM
ILNNRLTSNLDTLVSSLNYARSVALEQGVNVRVCPLGTPGSTNCGNNWNSGWIVVTQPALGAATLLNSHQTNTNDPDINA
NVNSVLFDPHGLSTTQSNFSVCDSRGSSHARSAMVLATGFVQSGQTPGQAVWNNGAIVCP

Nucleotide

• Length: 663 bp

>NTDB_id=1147224 CKW04_RS04735 WP_095197492.1 976498..977160(-) (fimT) [Legionella waltersii strain NCTC13017]
ATGAATAGTAGTTTATTGTGCATGGATGAAAATATGGTATTCAGTGAAGGTCATGTTGTACACAGTACCCAATTTGAACG
TATGGGCGATTGTTATACGCCTGGCAAGGTGCGTTTGCAAAAAATCAGTAACCCAACTGTTTTTGAGGTATTCACTGGAT
TTACTCTCATCGAGTTGCTAGTAACCCTGACTGTGTTTGCAATCATACTGACCTTAATTGTTCCCTCATTACAAACCATG
ATCTTAAATAACCGACTAACTTCCAATTTAGATACGTTGGTTAGCTCCTTAAATTATGCTCGCAGCGTAGCCTTAGAACA
AGGAGTCAACGTTAGGGTGTGTCCATTAGGCACCCCAGGATCGACAAATTGCGGGAATAATTGGAACTCCGGATGGATCG
TAGTAACCCAACCAGCGCTCGGTGCAGCTACTCTTTTGAACTCTCACCAAACGAATACAAACGACCCTGACATTAACGCA
AATGTGAACAGTGTCTTATTTGATCCTCATGGATTAAGCACGACTCAAAGCAACTTTAGCGTTTGTGATAGCAGAGGAAG
CTCTCATGCTCGATCTGCAATGGTCTTAGCCACTGGTTTTGTGCAATCAGGCCAAACTCCTGGGCAGGCAGTTTGGAATA
ACGGTGCAATAGTTTGCCCATAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (53-73)

• Type II transport protein GspH (GspH) (91-193)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	63.927	99.545	0.636