Detailed information NTG1147182

Bioinformatically predicted

Overview

• Name: pilH
• Type: Machinery gene
• Locus tag: CKV76_RS03445
• Genome accession: NZ_LT906440
• Coordinates: 585128..585790 (+)
• Length: 220 a.a.
• NCBI ID: WP_047916986.1
• Uniprot ID: A0AA44U7R7
• Organism: Neisseria gonorrhoeae strain NCTC13798
• Function: type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 580128..590790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV76_RS03410 (SAMEA4076741_00587)	cysT	580305..581134 (-)	830	Protein_578	sulfate ABC transporter permease subunit CysT	-
CKV76_RS03415 (SAMEA4076741_00588)	-	581320..581652 (+)	333	WP_003687908.1	hypothetical protein	-
CKV76_RS03420 (SAMEA4076741_00589)	-	581982..582491 (+)	510	WP_003687909.1	isoprenylcysteine carboxyl methyltransferase family protein	-
CKV76_RS03430 (SAMEA4076741_00590)	-	582723..583304 (-)	582	WP_003690895.1	superoxide dismutase	-
CKV76_RS03440 (SAMEA4076741_00591)	dnaB	583468..584871 (+)	1404	WP_012503477.1	replicative DNA helicase	-
CKV76_RS15270	-	584865..584977 (-)	113	Protein_583	IS5/IS1182 family transposase	-
CKV76_RS03445 (SAMEA4076741_00592)	pilH	585128..585790 (+)	663	WP_047916986.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
CKV76_RS03450 (SAMEA4076741_00593)	pilI	585822..586436 (+)	615	WP_012503479.1	type IV pilus modification protein PilV	Machinery gene
CKV76_RS03455 (SAMEA4076741_00594)	pilJ	586433..587395 (+)	963	WP_047921846.1	PilW family protein	Machinery gene
CKV76_RS03460 (SAMEA4076741_00595)	pilK	587374..587982 (+)	609	WP_047921847.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
CKV76_RS03465 (SAMEA4076741_00596)	pilL	587984..588457 (+)	474	WP_012503482.1	PilX family type IV pilin	Machinery gene
CKV76_RS03470 (SAMEA4076741_00597)	-	588527..588835 (-)	309	WP_003706588.1	AzlD family protein	-
CKV76_RS03475	-	588832..589543 (-)	712	Protein_590	AzlC family ABC transporter permease	-
CKV76_RS03480 (SAMEA4076741_00600)	dut	589709..590161 (+)	453	WP_003701071.1	dUTP diphosphatase	-

Sequence

Protein

• Length: 220 a.a.
• Molecular weight: 24557.00 Da
• Isoelectric Point: 9.6166

>NTDB_id=1147182 CKV76_RS03445 WP_047916986.1 585128..585790(+) (pilH) [Neisseria gonorrhoeae strain NCTC13798]
MCTRKQQGFTLTELLIVMAIAAIMATIALPNMSGWIASRRIASHAEQVANLLRFSRGEAVRLNLPVYICPVQVKKDGASN
NRCDFSKKGWGMLAFGDKNDNKAYDGDATDVFLRSVVLNDTDDSRINYTFNHIAFGSSQPKADRVVWTFNQNGTFGYLPD
QNLKNNFKFVYSDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCRKNDTRAVCKH

Nucleotide

• Length: 663 bp

>NTDB_id=1147182 CKV76_RS03445 WP_047916986.1 585128..585790(+) (pilH) [Neisseria gonorrhoeae strain NCTC13798]
ATGTGTACACGAAAACAACAAGGTTTCACGCTAACAGAGCTGCTCATCGTGATGGCCATCGCAGCCATTATGGCGACGAT
AGCCCTCCCCAATATGAGTGGGTGGATTGCATCACGCCGCATTGCCAGTCACGCGGAGCAGGTTGCCAACCTTTTGCGTT
TCTCCAGGGGCGAAGCCGTCCGGCTCAATCTCCCTGTCTATATCTGTCCTGTTCAAGTTAAAAAAGACGGTGCGTCCAAC
AATAGATGTGACTTCAGCAAGAAGGGGTGGGGAATGTTGGCTTTCGGCGACAAAAACGACAATAAGGCATATGACGGCGA
TGCGACGGATGTTTTCCTCCGCAGCGTGGTGTTGAATGATACCGACGACAGCCGGATTAATTACACCTTCAATCATATCG
CTTTCGGTTCGTCTCAGCCGAAAGCCGACCGTGTAGTTTGGACTTTCAACCAAAACGGGACATTCGGCTATTTGCCCGAT
CAGAATCTCAAGAATAATTTCAAATTTGTTTATTCTGACGGTTATATCCAAATCGTGCTGACAGATGCGAGAGCAGTTTC
AGATGCCGATAAGAAATTCCGTTCGGCGGTGGTTTTGATTAACAGCAGCGGCAGGGTCGAAGTTTGTCGTAAAAACGATA
CGCGCGCCGTATGCAAACATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (4-29)

• Type II transport protein GspH (GspH) (44-204)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilH	Neisseria gonorrhoeae MS11	95.455	100	0.955