Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CKV83_RS11010 | Genome accession | NZ_LT906439 |
| Coordinates | 2336872..2339301 (+) | Length | 809 a.a. |
| NCBI ID | WP_018374175.1 | Uniprot ID | A0A239T130 |
| Organism | Streptococcus merionis strain NCTC13788 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2331872..2344301
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV83_RS10985 (SAMEA4412692_02194) | - | 2332970..2333170 (+) | 201 | WP_018374169.1 | hypothetical protein | - |
| CKV83_RS10990 (SAMEA4412692_02195) | rhaD | 2333167..2334000 (+) | 834 | WP_018374170.1 | rhamnulose-1-phosphate aldolase | - |
| CKV83_RS10995 (SAMEA4412692_02196) | rpsB | 2334236..2335018 (+) | 783 | WP_018374171.1 | 30S ribosomal protein S2 | - |
| CKV83_RS11000 (SAMEA4412692_02197) | tsf | 2335083..2336123 (+) | 1041 | WP_018374172.1 | translation elongation factor Ts | - |
| CKV83_RS11005 (SAMEA4412692_02198) | - | 2336407..2336862 (+) | 456 | WP_018374174.1 | CtsR family transcriptional regulator | - |
| CKV83_RS11010 (SAMEA4412692_02199) | clpC | 2336872..2339301 (+) | 2430 | WP_018374175.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| CKV83_RS11015 (SAMEA4412692_02200) | tyrS | 2339663..2340922 (-) | 1260 | WP_018374176.1 | tyrosine--tRNA ligase | - |
| CKV83_RS11020 (SAMEA4412692_02201) | pbp1b | 2341290..2343791 (+) | 2502 | WP_018374178.1 | penicillin-binding protein PBP1B | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89538.32 Da Isoelectric Point: 5.8249
>NTDB_id=1147162 CKV83_RS11010 WP_018374175.1 2336872..2339301(+) (clpC) [Streptococcus merionis strain NCTC13788]
MKLSHGMRTVWEDGQILAQRYGCQSVETWHILLSFVGNLESIAGATLHDFDFDYSDYEQAIYAVTEKEMLEEVGDFDVLP
HSKRLHNITEFAKSIAQTLKAKELGTEHLLLAIILDHSSLASRVLEEVGFASEQGDHDVTMIDLRKNLEHKAGITKTDIK
AIRSMLKGNSGSPKGNMANMMGMPSTPSGGLEDYTRDLTEAARQGEMEPVIGRDAEISRMIQVLSRKTKNNPVLVGEAGV
GKTALALGLAQRIAEGKVPAKLAKMRVLELELMSVIAGTRFRGDFEERMNNIIEDIEADGQVILFVDELHTIMGSGSGID
STMDAANILKPALSRGTLHMVGATTQNEFQKHIEKDAALSRRFAKITVDSPSEADAVSILQGLKATYENHHQVSISDEAV
ETAVRYAKRYLTSKNLPDSAIDLLDETAATMQNRASHAGVQPELTDLDRALMAGQLKKVSHLLNIGEDFSVNEVTEADIL
DTLSRLSGIPVSKLTKTEAKKYLNLELELHKRVIGQDAAISAVARAIRRNQSGIRQTKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALLRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDTFNILLQVLDDG
QLTDSRGRKVDFSNTLIIMTSNLGATALRDDKTVGFASKDLRFDHANMEKRIFEELKRHYRPEFLNRIDEKIVFHSLTAE
NMQEVVKIMVQPVVMSLEEKGIRVKLQPSALKRLAELGYNPEMGARPLRRAIQTEIEDPLAEKLLSGDLTTGHLLKIGIK
NNAFKFDIA
MKLSHGMRTVWEDGQILAQRYGCQSVETWHILLSFVGNLESIAGATLHDFDFDYSDYEQAIYAVTEKEMLEEVGDFDVLP
HSKRLHNITEFAKSIAQTLKAKELGTEHLLLAIILDHSSLASRVLEEVGFASEQGDHDVTMIDLRKNLEHKAGITKTDIK
AIRSMLKGNSGSPKGNMANMMGMPSTPSGGLEDYTRDLTEAARQGEMEPVIGRDAEISRMIQVLSRKTKNNPVLVGEAGV
GKTALALGLAQRIAEGKVPAKLAKMRVLELELMSVIAGTRFRGDFEERMNNIIEDIEADGQVILFVDELHTIMGSGSGID
STMDAANILKPALSRGTLHMVGATTQNEFQKHIEKDAALSRRFAKITVDSPSEADAVSILQGLKATYENHHQVSISDEAV
ETAVRYAKRYLTSKNLPDSAIDLLDETAATMQNRASHAGVQPELTDLDRALMAGQLKKVSHLLNIGEDFSVNEVTEADIL
DTLSRLSGIPVSKLTKTEAKKYLNLELELHKRVIGQDAAISAVARAIRRNQSGIRQTKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALLRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDTFNILLQVLDDG
QLTDSRGRKVDFSNTLIIMTSNLGATALRDDKTVGFASKDLRFDHANMEKRIFEELKRHYRPEFLNRIDEKIVFHSLTAE
NMQEVVKIMVQPVVMSLEEKGIRVKLQPSALKRLAELGYNPEMGARPLRRAIQTEIEDPLAEKLLSGDLTTGHLLKIGIK
NNAFKFDIA
Nucleotide
Download Length: 2430 bp
>NTDB_id=1147162 CKV83_RS11010 WP_018374175.1 2336872..2339301(+) (clpC) [Streptococcus merionis strain NCTC13788]
ATGAAATTATCACACGGTATGAGAACAGTCTGGGAAGATGGACAGATTTTAGCCCAGCGCTACGGCTGCCAGTCGGTTGA
AACTTGGCATATTTTGCTGAGTTTTGTTGGCAATTTAGAGTCTATCGCTGGTGCAACTTTGCATGATTTTGATTTTGACT
ATAGTGATTATGAACAAGCAATTTATGCAGTGACTGAAAAGGAAATGTTGGAGGAAGTCGGGGATTTTGATGTGCTTCCT
CATTCCAAACGCCTCCATAACATCACTGAGTTTGCCAAATCCATTGCCCAAACCTTGAAAGCTAAGGAACTTGGAACAGA
ACATCTCCTGTTAGCTATTATTTTGGATCACTCTTCCTTGGCCAGTCGTGTGCTGGAAGAGGTCGGTTTTGCTAGTGAGC
AGGGTGATCACGACGTCACGATGATCGATTTGCGTAAGAATCTAGAGCATAAAGCAGGGATTACTAAGACGGATATCAAA
GCCATTCGCTCCATGCTCAAGGGCAATTCCGGCAGTCCCAAGGGGAATATGGCAAACATGATGGGAATGCCTAGCACACC
AAGTGGAGGTCTGGAGGACTATACCAGAGATTTAACGGAGGCGGCTAGGCAGGGTGAGATGGAGCCTGTTATTGGACGTG
ACGCAGAAATTTCCCGTATGATTCAGGTTTTGAGTCGCAAAACCAAGAACAATCCTGTCCTAGTTGGAGAGGCTGGTGTT
GGAAAAACAGCTCTAGCTTTAGGACTGGCTCAGCGGATCGCTGAAGGTAAGGTGCCAGCCAAGTTGGCCAAGATGCGAGT
ATTAGAATTGGAGCTCATGTCTGTTATTGCTGGAACTCGTTTTCGTGGAGACTTTGAAGAGCGCATGAACAATATCATTG
AGGATATTGAAGCTGATGGGCAGGTTATTCTCTTTGTTGATGAGCTTCATACTATTATGGGCAGCGGTAGTGGGATTGAT
AGCACGATGGATGCGGCCAATATTCTCAAACCTGCCTTATCGCGTGGAACTCTCCACATGGTTGGAGCGACAACTCAAAA
TGAGTTTCAAAAGCATATTGAAAAAGATGCTGCGCTATCACGTCGCTTCGCTAAGATTACAGTAGATTCGCCATCTGAGG
CTGATGCTGTTAGCATCTTGCAGGGGCTGAAGGCTACCTATGAAAACCATCATCAGGTCTCTATTTCAGATGAGGCGGTA
GAAACGGCAGTTAGGTATGCTAAGCGCTATCTGACCAGTAAGAATTTGCCAGATTCAGCTATTGACCTTTTGGACGAGAC
AGCAGCAACGATGCAAAACAGGGCAAGTCATGCTGGTGTGCAACCTGAATTGACCGACCTTGATCGCGCTCTTATGGCTG
GTCAACTGAAAAAGGTCTCGCACCTCCTTAATATCGGAGAAGATTTCTCGGTAAATGAAGTGACGGAAGCAGATATCCTA
GATACCCTAAGCCGTCTGTCAGGTATTCCGGTCAGTAAGTTGACCAAGACTGAGGCCAAGAAATACCTTAACTTGGAATT
GGAATTACATAAGCGGGTTATCGGTCAAGACGCTGCTATATCAGCAGTTGCTCGTGCCATTCGCCGCAATCAATCAGGTA
TTCGTCAGACCAAGCGCCCAATAGGCTCCTTCATGTTTTTGGGACCAACAGGTGTCGGCAAGACCGAGCTAGCCAAGGCT
TTGGCTGAAGTTCTTTTTGACGATGAATCTGCCCTGCTTCGTTTTGACATGTCTGAGTATATGGAAAAATTTGCAGCGAG
TCGTCTCAACGGTGCTCCTCCTGGTTATGTCGGTTATGAAGAAGGTGGCGAGTTAACTGAAAAGGTCCGCAACAAGCCGT
ATTCTGTCCTCCTTTTTGATGAAGTTGAAAAAGCCCACCCTGACACCTTTAATATTTTGTTACAGGTTTTGGATGATGGC
CAATTAACGGATAGTCGTGGTCGCAAAGTTGATTTTTCCAATACTTTGATCATCATGACCTCAAACCTTGGAGCAACAGC
TTTACGGGATGACAAGACGGTCGGTTTTGCTAGCAAGGACCTTCGCTTTGATCATGCCAATATGGAAAAACGAATTTTTG
AAGAGCTCAAGCGCCATTATCGCCCAGAATTTCTTAACCGCATTGATGAAAAAATCGTCTTCCATAGCTTGACAGCTGAA
AACATGCAAGAAGTCGTTAAGATTATGGTTCAACCAGTGGTGATGAGTCTTGAGGAGAAAGGCATTAGGGTCAAGTTGCA
ACCATCTGCTCTTAAACGTTTGGCAGAACTTGGCTACAATCCTGAAATGGGGGCAAGGCCGCTACGTCGTGCTATTCAGA
CAGAGATTGAAGACCCGTTAGCTGAAAAGCTCCTCTCAGGCGATTTAACGACTGGCCATCTTCTCAAAATAGGCATTAAA
AACAATGCTTTCAAGTTTGACATTGCGTAG
ATGAAATTATCACACGGTATGAGAACAGTCTGGGAAGATGGACAGATTTTAGCCCAGCGCTACGGCTGCCAGTCGGTTGA
AACTTGGCATATTTTGCTGAGTTTTGTTGGCAATTTAGAGTCTATCGCTGGTGCAACTTTGCATGATTTTGATTTTGACT
ATAGTGATTATGAACAAGCAATTTATGCAGTGACTGAAAAGGAAATGTTGGAGGAAGTCGGGGATTTTGATGTGCTTCCT
CATTCCAAACGCCTCCATAACATCACTGAGTTTGCCAAATCCATTGCCCAAACCTTGAAAGCTAAGGAACTTGGAACAGA
ACATCTCCTGTTAGCTATTATTTTGGATCACTCTTCCTTGGCCAGTCGTGTGCTGGAAGAGGTCGGTTTTGCTAGTGAGC
AGGGTGATCACGACGTCACGATGATCGATTTGCGTAAGAATCTAGAGCATAAAGCAGGGATTACTAAGACGGATATCAAA
GCCATTCGCTCCATGCTCAAGGGCAATTCCGGCAGTCCCAAGGGGAATATGGCAAACATGATGGGAATGCCTAGCACACC
AAGTGGAGGTCTGGAGGACTATACCAGAGATTTAACGGAGGCGGCTAGGCAGGGTGAGATGGAGCCTGTTATTGGACGTG
ACGCAGAAATTTCCCGTATGATTCAGGTTTTGAGTCGCAAAACCAAGAACAATCCTGTCCTAGTTGGAGAGGCTGGTGTT
GGAAAAACAGCTCTAGCTTTAGGACTGGCTCAGCGGATCGCTGAAGGTAAGGTGCCAGCCAAGTTGGCCAAGATGCGAGT
ATTAGAATTGGAGCTCATGTCTGTTATTGCTGGAACTCGTTTTCGTGGAGACTTTGAAGAGCGCATGAACAATATCATTG
AGGATATTGAAGCTGATGGGCAGGTTATTCTCTTTGTTGATGAGCTTCATACTATTATGGGCAGCGGTAGTGGGATTGAT
AGCACGATGGATGCGGCCAATATTCTCAAACCTGCCTTATCGCGTGGAACTCTCCACATGGTTGGAGCGACAACTCAAAA
TGAGTTTCAAAAGCATATTGAAAAAGATGCTGCGCTATCACGTCGCTTCGCTAAGATTACAGTAGATTCGCCATCTGAGG
CTGATGCTGTTAGCATCTTGCAGGGGCTGAAGGCTACCTATGAAAACCATCATCAGGTCTCTATTTCAGATGAGGCGGTA
GAAACGGCAGTTAGGTATGCTAAGCGCTATCTGACCAGTAAGAATTTGCCAGATTCAGCTATTGACCTTTTGGACGAGAC
AGCAGCAACGATGCAAAACAGGGCAAGTCATGCTGGTGTGCAACCTGAATTGACCGACCTTGATCGCGCTCTTATGGCTG
GTCAACTGAAAAAGGTCTCGCACCTCCTTAATATCGGAGAAGATTTCTCGGTAAATGAAGTGACGGAAGCAGATATCCTA
GATACCCTAAGCCGTCTGTCAGGTATTCCGGTCAGTAAGTTGACCAAGACTGAGGCCAAGAAATACCTTAACTTGGAATT
GGAATTACATAAGCGGGTTATCGGTCAAGACGCTGCTATATCAGCAGTTGCTCGTGCCATTCGCCGCAATCAATCAGGTA
TTCGTCAGACCAAGCGCCCAATAGGCTCCTTCATGTTTTTGGGACCAACAGGTGTCGGCAAGACCGAGCTAGCCAAGGCT
TTGGCTGAAGTTCTTTTTGACGATGAATCTGCCCTGCTTCGTTTTGACATGTCTGAGTATATGGAAAAATTTGCAGCGAG
TCGTCTCAACGGTGCTCCTCCTGGTTATGTCGGTTATGAAGAAGGTGGCGAGTTAACTGAAAAGGTCCGCAACAAGCCGT
ATTCTGTCCTCCTTTTTGATGAAGTTGAAAAAGCCCACCCTGACACCTTTAATATTTTGTTACAGGTTTTGGATGATGGC
CAATTAACGGATAGTCGTGGTCGCAAAGTTGATTTTTCCAATACTTTGATCATCATGACCTCAAACCTTGGAGCAACAGC
TTTACGGGATGACAAGACGGTCGGTTTTGCTAGCAAGGACCTTCGCTTTGATCATGCCAATATGGAAAAACGAATTTTTG
AAGAGCTCAAGCGCCATTATCGCCCAGAATTTCTTAACCGCATTGATGAAAAAATCGTCTTCCATAGCTTGACAGCTGAA
AACATGCAAGAAGTCGTTAAGATTATGGTTCAACCAGTGGTGATGAGTCTTGAGGAGAAAGGCATTAGGGTCAAGTTGCA
ACCATCTGCTCTTAAACGTTTGGCAGAACTTGGCTACAATCCTGAAATGGGGGCAAGGCCGCTACGTCGTGCTATTCAGA
CAGAGATTGAAGACCCGTTAGCTGAAAAGCTCCTCTCAGGCGATTTAACGACTGGCCATCTTCTCAAAATAGGCATTAAA
AACAATGCTTTCAAGTTTGACATTGCGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
69.089 |
100 |
0.693 |
| clpC | Streptococcus pneumoniae D39 |
69.089 |
100 |
0.693 |
| clpC | Streptococcus pneumoniae TIGR4 |
69.089 |
100 |
0.693 |
| clpC | Streptococcus mutans UA159 |
63.569 |
99.753 |
0.634 |
| clpC | Streptococcus thermophilus LMD-9 |
62.931 |
100 |
0.632 |
| clpC | Streptococcus thermophilus LMG 18311 |
62.685 |
100 |
0.629 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.671 |
100 |
0.498 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.811 |
100 |
0.454 |
| clpE | Streptococcus mutans UA159 |
47.896 |
76.391 |
0.366 |