Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   CKV83_RS10665 Genome accession   NZ_LT906439
Coordinates   2265731..2266456 (+) Length   241 a.a.
NCBI ID   WP_018374108.1    Uniprot ID   A0A239T039
Organism   Streptococcus merionis strain NCTC13788     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2260731..2271456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CKV83_RS10640 (SAMEA4412692_02125) tsaE 2262643..2263083 (+) 441 WP_018374103.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  CKV83_RS10645 (SAMEA4412692_02126) - 2263076..2263609 (+) 534 WP_018374104.1 GNAT family N-acetyltransferase -
  CKV83_RS10650 (SAMEA4412692_02127) brpA 2263612..2264781 (+) 1170 WP_408640781.1 biofilm formation/cell division transcriptional regulator BrpA -
  CKV83_RS10655 (SAMEA4412692_02128) - 2264960..2265253 (-) 294 WP_018374106.1 hypothetical protein -
  CKV83_RS10660 (SAMEA4412692_02129) - 2265256..2265669 (-) 414 WP_018374107.1 HIT family protein -
  CKV83_RS10665 (SAMEA4412692_02130) pptA 2265731..2266456 (+) 726 WP_018374108.1 ABC transporter ATP-binding protein Regulator
  CKV83_RS10670 (SAMEA4412692_02131) - 2266456..2267493 (+) 1038 WP_018374109.1 ABC transporter permease -
  CKV83_RS10675 (SAMEA4412692_02132) ccrZ 2267541..2268338 (+) 798 WP_018374110.1 cell cycle regulator CcrZ -
  CKV83_RS10680 (SAMEA4412692_02133) trmB 2268328..2268966 (+) 639 WP_018374111.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  CKV83_RS10685 (SAMEA4412692_02134) - 2269423..2270403 (-) 981 WP_018374112.1 AraC family transcriptional regulator -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26863.26 Da        Isoelectric Point: 4.6119

>NTDB_id=1147160 CKV83_RS10665 WP_018374108.1 2265731..2266456(+) (pptA) [Streptococcus merionis strain NCTC13788]
MLKLEKVTGGYANIPVLKNISFTINDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITIDGLSLAQNPEDYRKKIGFIP
ETPSLYEELTLREHIELMALAYGISTEVVMERAQRLLQIFRLQDRLDWFPVNFSKGMKQKVMIICAFIVTPSLLIVDEPF
LGLDPVAIQDLTDLLAEEKTKGTSILMSTHVLDSAEKMCDRFVILHHGEIKAEGNLEELRQAFAMPEASLNAIYLRLTEE
A

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1147160 CKV83_RS10665 WP_018374108.1 2265731..2266456(+) (pptA) [Streptococcus merionis strain NCTC13788]
ATGCTAAAACTTGAAAAGGTGACAGGTGGCTATGCCAATATCCCTGTCCTCAAAAACATTTCCTTTACCATTAATGACGG
CGAATTAGTCGGCTTAATCGGTCTTAATGGTGCAGGTAAATCTACTACCATCAACGAAATCATCGGACTCTTGACTCCCT
ATCAAGGTCAAATCACGATTGATGGGCTAAGCCTTGCCCAAAATCCTGAAGATTATCGTAAAAAAATTGGCTTTATTCCA
GAAACACCGAGTCTCTATGAGGAGTTGACGCTTCGTGAGCATATTGAGCTGATGGCATTGGCTTACGGTATATCAACGGA
AGTGGTTATGGAGAGGGCTCAGCGTTTGCTACAGATTTTTCGATTGCAGGACCGTTTGGATTGGTTTCCGGTGAATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATCGTCACTCCAAGTCTTCTGATTGTCGATGAACCATTT
TTGGGACTTGACCCTGTGGCTATTCAGGATTTGACGGATCTCTTAGCTGAGGAAAAAACCAAAGGGACTTCAATACTGAT
GTCTACTCACGTGTTGGACTCGGCTGAGAAGATGTGTGACCGCTTTGTGATTTTACATCATGGTGAGATTAAGGCGGAGG
GAAATCTGGAAGAGCTGCGTCAGGCTTTTGCTATGCCAGAAGCTAGTCTCAATGCCATCTATCTGCGTTTGACGGAGGAG
GCCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A239T039

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

74.059

99.17

0.734

Multiple sequence alignment