Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   BQ8897_RS02635 Genome accession   NZ_LT714196
Coordinates   435033..435758 (+) Length   241 a.a.
NCBI ID   WP_000912314.1    Uniprot ID   A0AAW6XYE4
Organism   Streptococcus agalactiae isolate BM110     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 430033..440758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BQ8897_RS02600 (BQ8897_BM110_00491) tsaE 430835..431278 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  BQ8897_RS02605 (BQ8897_BM110_00492) - 431271..431792 (+) 522 WP_000043149.1 GNAT family N-acetyltransferase -
  BQ8897_RS02610 (BQ8897_BM110_00493) brpA 431801..433108 (+) 1308 WP_000708161.1 biofilm formation/cell division transcriptional regulator BrpA -
  BQ8897_RS02615 (BQ8897_BM110_00494) - 433172..433468 (-) 297 WP_000690175.1 hypothetical protein -
  BQ8897_RS02620 (BQ8897_BM110_00495) - 433465..433884 (-) 420 WP_000368099.1 HIT family protein -
  BQ8897_RS02625 (BQ8897_BM110_00496) - 434220..434723 (+) 504 WP_000773459.1 hypothetical protein -
  BQ8897_RS02630 - 434775..434961 (-) 187 Protein_436 hypothetical protein -
  BQ8897_RS02635 (BQ8897_BM110_00497) pptA 435033..435758 (+) 726 WP_000912314.1 ABC transporter ATP-binding protein Regulator
  BQ8897_RS02640 (BQ8897_BM110_00498) - 435760..436794 (+) 1035 WP_000732710.1 ABC transporter permease -
  BQ8897_RS02645 (BQ8897_BM110_00499) ccrZ 436852..437652 (+) 801 WP_000155920.1 cell cycle regulator CcrZ -
  BQ8897_RS02650 (BQ8897_BM110_00500) trmB 437642..438277 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BQ8897_RS02660 (BQ8897_BM110_00502) rimP 438766..439242 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  BQ8897_RS02665 (BQ8897_BM110_00503) nusA 439278..440429 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  BQ8897_RS02670 (BQ8897_BM110_00504) rnpM 440451..440747 (+) 297 WP_001140526.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26834.27 Da        Isoelectric Point: 4.6310

>NTDB_id=1146146 BQ8897_RS02635 WP_000912314.1 435033..435758(+) (pptA) [Streptococcus agalactiae isolate BM110]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1146146 BQ8897_RS02635 WP_000912314.1 435033..435758(+) (pptA) [Streptococcus agalactiae isolate BM110]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGAGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATCTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768

  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763


Multiple sequence alignment