Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   EDCC5055_RS14155 Genome accession   NZ_LT671859
Coordinates   2691352..2692239 (-) Length   295 a.a.
NCBI ID   WP_015581923.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate Clinical isolate     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2686352..2697239
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EDCC5055_RS14120 - 2686371..2686463 (+) 93 WP_010956583.1 hypothetical protein -
  EDCC5055_RS14125 (EDCC5055_02598) - 2686571..2687068 (-) 498 WP_001065268.1 glutathione peroxidase -
  EDCC5055_RS14130 - 2687078..2687338 (-) 261 WP_001789910.1 hypothetical protein -
  EDCC5055_RS14140 - 2687720..2687833 (-) 114 WP_011447078.1 hypothetical protein -
  EDCC5055_RS14145 (EDCC5055_02599) - 2688492..2690492 (-) 2001 WP_000776751.1 ABC transporter permease -
  EDCC5055_RS14150 (EDCC5055_02600) - 2690489..2691244 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  EDCC5055_RS14155 (EDCC5055_02601) braS 2691352..2692239 (-) 888 WP_015581923.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  EDCC5055_RS14160 (EDCC5055_02602) braR 2692250..2692915 (-) 666 WP_000697886.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  EDCC5055_RS14165 (EDCC5055_02603) - 2692941..2693141 (-) 201 WP_000604728.1 hypothetical protein -
  EDCC5055_RS14170 (EDCC5055_02604) - 2693339..2694763 (+) 1425 WP_000953744.1 alkaline phosphatase -
  EDCC5055_RS15375 (EDCC5055_02605) - 2694823..2694924 (-) 102 WP_000731972.1 SE2200 family small protein -
  EDCC5055_RS14180 (EDCC5055_02606) - 2695046..2695501 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  EDCC5055_RS14185 (EDCC5055_02607) - 2695746..2696507 (-) 762 WP_000323455.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34088.39 Da        Isoelectric Point: 6.3011

>NTDB_id=1146061 EDCC5055_RS14155 WP_015581923.1 2691352..2692239(-) (braS) [Staphylococcus aureus isolate Clinical isolate]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVERYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=1146061 EDCC5055_RS14155 WP_015581923.1 2691352..2692239(-) (braS) [Staphylococcus aureus isolate Clinical isolate]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTGTTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGATACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993


Multiple sequence alignment