Detailed information NTG1145957

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BQ6873_RS14380
• Genome accession: NZ_LT671418
• Coordinates: 3027412..3028482 (-)
• Length: 356 a.a.
• NCBI ID: WP_076593256.1
• Uniprot ID: -
• Organism: Herminiimonas arsenitoxidans strain AS8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3022412..3033482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BQ6873_RS14355	cyoE	3023029..3023913 (+)	885	WP_076593251.1	heme o synthase	-
BQ6873_RS14360	-	3023917..3024513 (+)	597	WP_076593252.1	SCO family protein	-
BQ6873_RS14365	rpoH	3024572..3025468 (-)	897	WP_076593253.1	RNA polymerase sigma factor RpoH	-
BQ6873_RS14370	ftsX	3025788..3026714 (-)	927	WP_076593254.1	permease-like cell division protein FtsX	-
BQ6873_RS14375	-	3026711..3027403 (-)	693	WP_076593255.1	cell division ATP-binding protein FtsE	-
BQ6873_RS14380	pilA	3027412..3028482 (-)	1071	WP_076593256.1	signal recognition particle-docking protein FtsY	Machinery gene
BQ6873_RS14385	-	3028574..3029944 (+)	1371	WP_076594152.1	insulinase family protein	-
BQ6873_RS14390	-	3030002..3031318 (+)	1317	WP_157889173.1	pitrilysin family protein	-
BQ6873_RS14395	rsmD	3031408..3032064 (+)	657	WP_076593258.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BQ6873_RS14400	coaD	3032208..3032693 (+)	486	WP_076593259.1	pantetheine-phosphate adenylyltransferase	-
BQ6873_RS14405	-	3032712..3032981 (+)	270	WP_076593260.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 38109.20 Da
• Isoelectric Point: 6.6192

>NTDB_id=1145957 BQ6873_RS14380 WP_076593256.1 3027412..3028482(-) (pilA) [Herminiimonas arsenitoxidans strain AS8]
MFSFFKKKPQEPAPVPQVPPAPANEHQTPPASEPLIAPAPLEIEPPAEIVAAVTPVEQKQSWMARLKVGLSKTSSNLTTL
FVGAKIDDDLYEELESALLMSDAGVDATQFLLDALKRKVKNEKLTEASQVKTALRILLLEMLTPLQKPLVLGQHQPLVMM
ITGVNGAGKTTTIGKLAKHLQAHNQSVLLAAGDTFRAAAREQLTVWGQRNNVTVIAQESGDPAAVAFDAVHSAQARGTNV
VMVDTAGRLPTQLHLMEELKKIKRVMAKGMSSAPHEILLIIDGNTGQNALTQVKAFDDALGLTGLVVTKLDGTAKGGVLA
AIARARPIPVYFIGVGEQIEDLQPFNAQEFVEALLG

Nucleotide

• Length: 1071 bp

>NTDB_id=1145957 BQ6873_RS14380 WP_076593256.1 3027412..3028482(-) (pilA) [Herminiimonas arsenitoxidans strain AS8]
ATGTTTAGTTTCTTCAAGAAAAAACCGCAAGAACCCGCGCCGGTACCGCAAGTACCGCCAGCGCCTGCGAACGAACACCA
GACACCTCCAGCTTCCGAGCCGCTGATTGCACCTGCACCGCTGGAAATCGAGCCACCGGCAGAAATCGTCGCCGCCGTTA
CGCCGGTAGAGCAAAAGCAATCATGGATGGCCAGACTGAAGGTCGGCCTTTCCAAAACGTCATCCAATCTGACGACTTTA
TTCGTCGGCGCCAAGATCGACGACGATTTGTACGAGGAACTGGAATCGGCGCTGCTAATGTCCGATGCTGGTGTCGACGC
CACGCAATTCCTGCTGGATGCGCTCAAACGCAAGGTCAAGAATGAAAAACTGACCGAAGCCTCGCAGGTGAAAACCGCCT
TGCGCATCCTGCTGCTGGAAATGCTGACGCCTTTGCAAAAACCGCTAGTCCTGGGCCAACACCAACCGCTGGTCATGATG
ATCACCGGCGTCAATGGTGCGGGCAAGACCACCACCATAGGCAAACTGGCCAAACATCTGCAGGCGCACAACCAATCGGT
ATTGCTGGCCGCCGGCGACACCTTCCGCGCCGCAGCACGTGAACAATTGACGGTTTGGGGCCAGCGCAACAATGTGACCG
TGATCGCGCAGGAATCAGGTGATCCGGCCGCCGTCGCCTTCGATGCCGTGCATTCGGCACAGGCACGCGGTACCAATGTC
GTGATGGTTGATACGGCAGGACGCCTGCCGACACAACTCCATCTGATGGAAGAGTTGAAAAAGATTAAACGCGTGATGGC
CAAAGGCATGTCGTCCGCACCGCATGAAATCCTGTTGATCATAGATGGCAACACAGGACAAAATGCGCTGACACAAGTCA
AAGCCTTCGACGATGCTTTGGGGCTGACAGGTTTGGTCGTCACCAAACTCGACGGCACCGCGAAAGGCGGCGTACTGGCT
GCCATCGCACGCGCACGACCGATCCCGGTTTACTTCATCGGCGTCGGTGAGCAGATCGAAGATTTACAGCCTTTCAATGC
ACAGGAATTTGTAGAAGCTCTATTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (157-356)

• SRP54-type protein, helical bundle domain (SRP54_N) (76-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	59.032	87.079	0.514