Detailed information NTG1145821

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: CS896_RS06740
• Genome accession: NZ_LT635474
• Coordinates: 1363430..1364881 (+)
• Length: 483 a.a.
• NCBI ID: WP_089087212.1
• Uniprot ID: A0A238GX06
• Organism: Helicobacter pylori isolate HE171/09
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1358430..1369881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CS896_RS06720	glmS	1359065..1360858 (-)	1794	WP_089087209.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
CS896_RS06725	-	1360859..1361098 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
CS896_RS06730	-	1361133..1361675 (-)	543	WP_089087210.1	purine-nucleoside phosphorylase	-
CS896_RS06735	dnaA	1361828..1363201 (+)	1374	WP_089087211.1	chromosomal replication initiator protein DnaA	-
CS896_RS06740	comH	1363430..1364881 (+)	1452	WP_089087212.1	competence protein	Machinery gene
CS896_RS06750	-	1365061..1365813 (+)	753	WP_078295316.1	exodeoxyribonuclease III	-
CS896_RS06755	-	1365810..1366445 (-)	636	WP_000668058.1	outer membrane protein	-
CS896_RS06760	-	1366449..1366796 (-)	348	WP_000837062.1	hypothetical protein	-
CS896_RS06765	recG	1366873..1368744 (+)	1872	WP_089087395.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 483 a.a.
• Molecular weight: 55168.01 Da
• Isoelectric Point: 6.7016

>NTDB_id=1145821 CS896_RS06740 WP_089087212.1 1363430..1364881(+) (comH) [Helicobacter pylori isolate HE171/09]
MKKSLYLSFFLTFSNPLQALVIELLEEIKTSSHKGTFKAKVLDSKEPKQVLGIYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKISPANEVKTPTNDANPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADASENNENNENNENNRDNVEKQAIRDPNI
KEFACGKWVYDDENLQAYRPSVLKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAI
LQARSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEIT
RNELNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLF
NEV

Nucleotide

• Length: 1452 bp

>NTDB_id=1145821 CS896_RS06740 WP_089087212.1 1363430..1364881(+) (comH) [Helicobacter pylori isolate HE171/09]
ATGAAAAAATCCCTTTATTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGTCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAGCCCAAACAGGTTTTAGGCATTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTACTATTCCCAGAAACACCCAAATCGTTTTTTCTTCAAAGGA
ATTAAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCCTATCCAGAATCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAATAAGCCCTGCTAACGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATGCGA
GTGAAAACAATGAAAACAATGAAAACAATGAAAATAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATC
AAGGAATTCGCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCGTTTTAAAACGCGTTGA
TAAAGACAAAGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAGATCATTACCC
CTTATACCAAAATTTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAACAATTTCGCCATT
CTCCAAGCCAGAAGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGAT
AGAAGAGCCTTTAAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCA
AACAAGACGACCAAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACG
CGCAATGAATTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAA
AGAGAGCAGCGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAG
AACAACCACGAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTC
AATGAAGTTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A238GX06

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.511	100	0.915