Detailed information NTG1145752

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: CS890_RS06770
• Genome accession: NZ_LT635471
• Coordinates: 1366200..1367651 (+)
• Length: 483 a.a.
• NCBI ID: WP_089087212.1
• Uniprot ID: A0A238GX06
• Organism: Helicobacter pylori isolate HE141/09
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1361200..1372651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CS890_RS06750	glmS	1361835..1363628 (-)	1794	WP_089087209.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
CS890_RS06755	-	1363629..1363868 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
CS890_RS06760	-	1363903..1364445 (-)	543	WP_089087210.1	purine-nucleoside phosphorylase	-
CS890_RS06765	dnaA	1364598..1365971 (+)	1374	WP_089087211.1	chromosomal replication initiator protein DnaA	-
CS890_RS06770	comH	1366200..1367651 (+)	1452	WP_089087212.1	competence protein	Machinery gene
CS890_RS06780	-	1367831..1368583 (+)	753	WP_078295316.1	exodeoxyribonuclease III	-
CS890_RS06785	-	1368580..1369215 (-)	636	WP_000668058.1	outer membrane protein	-
CS890_RS06790	-	1369219..1369566 (-)	348	WP_000837062.1	hypothetical protein	-
CS890_RS06795	recG	1369643..1371514 (+)	1872	WP_089087395.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 483 a.a.
• Molecular weight: 55168.01 Da
• Isoelectric Point: 6.7016

>NTDB_id=1145752 CS890_RS06770 WP_089087212.1 1366200..1367651(+) (comH) [Helicobacter pylori isolate HE141/09]
MKKSLYLSFFLTFSNPLQALVIELLEEIKTSSHKGTFKAKVLDSKEPKQVLGIYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKISPANEVKTPTNDANPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADASENNENNENNENNRDNVEKQAIRDPNI
KEFACGKWVYDDENLQAYRPSVLKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAI
LQARSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEIT
RNELNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLF
NEV

Nucleotide

• Length: 1452 bp

>NTDB_id=1145752 CS890_RS06770 WP_089087212.1 1366200..1367651(+) (comH) [Helicobacter pylori isolate HE141/09]
ATGAAAAAATCCCTTTATTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGTCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAGCCCAAACAGGTTTTAGGCATTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTACTATTCCCAGAAACACCCAAATCGTTTTTTCTTCAAAGGA
ATTAAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCCTATCCAGAATCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAATAAGCCCTGCTAACGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATGCGA
GTGAAAACAATGAAAACAATGAAAACAATGAAAATAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATC
AAGGAATTCGCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCGTTTTAAAACGCGTTGA
TAAAGACAAAGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAGATCATTACCC
CTTATACCAAAATTTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAACAATTTCGCCATT
CTCCAAGCCAGAAGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGAT
AGAAGAGCCTTTAAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCA
AACAAGACGACCAAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACG
CGCAATGAATTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAA
AGAGAGCAGCGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAG
AACAACCACGAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTC
AATGAAGTTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A238GX06

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.511	100	0.915