Detailed information NTG1145729

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: CS893_RS06760
• Genome accession: NZ_LT635460
• Coordinates: 1363715..1365166 (+)
• Length: 483 a.a.
• NCBI ID: WP_089087212.1
• Uniprot ID: A0A238GX06
• Organism: Helicobacter pylori isolate HE178/09
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1358715..1370166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CS893_RS06740	glmS	1359350..1361143 (-)	1794	WP_089087209.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
CS893_RS06745	-	1361144..1361383 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
CS893_RS06750	-	1361418..1361960 (-)	543	WP_089087210.1	purine-nucleoside phosphorylase	-
CS893_RS06755	dnaA	1362113..1363486 (+)	1374	WP_089087211.1	chromosomal replication initiator protein DnaA	-
CS893_RS06760	comH	1363715..1365166 (+)	1452	WP_089087212.1	competence protein	Machinery gene
CS893_RS06770	-	1365346..1366098 (+)	753	WP_078295316.1	exodeoxyribonuclease III	-
CS893_RS06775	-	1366095..1366730 (-)	636	WP_000668058.1	outer membrane protein	-
CS893_RS06780	-	1366734..1367081 (-)	348	WP_000837062.1	hypothetical protein	-
CS893_RS06785	recG	1367158..1369029 (+)	1872	WP_089087395.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 483 a.a.
• Molecular weight: 55168.01 Da
• Isoelectric Point: 6.7016

>NTDB_id=1145729 CS893_RS06760 WP_089087212.1 1363715..1365166(+) (comH) [Helicobacter pylori isolate HE178/09]
MKKSLYLSFFLTFSNPLQALVIELLEEIKTSSHKGTFKAKVLDSKEPKQVLGIYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKISPANEVKTPTNDANPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADASENNENNENNENNRDNVEKQAIRDPNI
KEFACGKWVYDDENLQAYRPSVLKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAI
LQARSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEIT
RNELNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLF
NEV

Nucleotide

• Length: 1452 bp

>NTDB_id=1145729 CS893_RS06760 WP_089087212.1 1363715..1365166(+) (comH) [Helicobacter pylori isolate HE178/09]
ATGAAAAAATCCCTTTATTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGTCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAGCCCAAACAGGTTTTAGGCATTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTACTATTCCCAGAAACACCCAAATCGTTTTTTCTTCAAAGGA
ATTAAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCCTATCCAGAATCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAATAAGCCCTGCTAACGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATGCGA
GTGAAAACAATGAAAACAATGAAAACAATGAAAATAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATC
AAGGAATTCGCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCGTTTTAAAACGCGTTGA
TAAAGACAAAGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAGATCATTACCC
CTTATACCAAAATTTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAACAATTTCGCCATT
CTCCAAGCCAGAAGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGAT
AGAAGAGCCTTTAAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCA
AACAAGACGACCAAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACG
CGCAATGAATTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAA
AGAGAGCAGCGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAG
AACAACCACGAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTC
AATGAAGTTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A238GX06

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.511	100	0.915