Detailed information NTG1145635

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BT137_RS13025
• Genome accession: NZ_LT632617
• Coordinates: 2872597..2873664 (-)
• Length: 355 a.a.
• NCBI ID: WP_038839679.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain ST42 isolate ST42
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2867597..2878664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BT137_RS13000 (EUL120_02592)	-	2867889..2868605 (-)	717	WP_038839675.1	dienelactone hydrolase family protein	-
BT137_RS13005 (EUL120_02593)	-	2868888..2869754 (+)	867	WP_011216536.1	alpha/beta hydrolase	-
BT137_RS13010 (EUL120_02594)	rpoH	2869886..2870740 (-)	855	WP_027266273.1	RNA polymerase sigma factor RpoH	-
BT137_RS13015 (EUL120_02595)	ftsX	2871037..2871966 (-)	930	WP_014844769.1	permease-like cell division protein FtsX	-
BT137_RS13020 (EUL120_02596)	ftsE	2871960..2872610 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
BT137_RS13025 (EUL120_02597)	pilA	2872597..2873664 (-)	1068	WP_038839679.1	signal recognition particle-docking protein FtsY	Machinery gene
BT137_RS13030 (EUL120_02598)	-	2873727..2875052 (+)	1326	WP_015961744.1	M16 family metallopeptidase	-
BT137_RS13035 (EUL120_02599)	-	2875049..2876353 (+)	1305	WP_027266270.1	M16 family metallopeptidase	-
BT137_RS13040 (EUL120_02600)	rsmD	2876350..2876895 (+)	546	WP_040147725.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BT137_RS13045 (EUL120_02601)	dotD	2876970..2877461 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
BT137_RS13050 (EUL120_02602)	dotC	2877442..2878353 (+)	912	WP_011216545.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39003.50 Da
• Isoelectric Point: 5.6860

>NTDB_id=1145635 BT137_RS13025 WP_038839679.1 2872597..2873664(-) (pilA) [Legionella pneumophila strain ST42 isolate ST42]
MIKWFKRNQNSEPNLDTEEQQDHAESSMESRLEEPQELTAKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGDAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=1145635 BT137_RS13025 WP_038839679.1 2872597..2873664(-) (pilA) [Legionella pneumophila strain ST42 isolate ST42]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAGCAAGATCATGCCGAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGCCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTAGCAAGAAAGCAACTGTCTAATGGTGACGCAGTTTATCAGACTTTAAAGACAAATTTGCAAACGATTT
TGAGTCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACTACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAACTTAATGGAAGAGTTGAAAAAAGTGAAAAGGGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (150-350)

• SRP54-type protein, helical bundle domain (SRP54_N) (64-130)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.063	89.014	0.49