Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   BT137_RS06300 Genome accession   NZ_LT632617
Coordinates   1350362..1350703 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila strain ST42 isolate ST42     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1345362..1355703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BT137_RS06275 (EUL120_01245) acpP 1346190..1346438 (+) 249 WP_003631752.1 acyl carrier protein -
  BT137_RS06280 (EUL120_01246) fabF 1346458..1347696 (+) 1239 WP_027266549.1 beta-ketoacyl-ACP synthase II -
  BT137_RS06285 (EUL120_01247) mltG 1347697..1348695 (+) 999 WP_038838265.1 endolytic transglycosylase MltG -
  BT137_RS06290 (EUL120_01248) tmk 1348695..1349333 (+) 639 WP_011215415.1 dTMP kinase -
  BT137_RS06295 (EUL120_01249) - 1349330..1350235 (+) 906 WP_038838267.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  BT137_RS06300 (EUL120_01250) pilZ 1350362..1350703 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  BT137_RS06305 (EUL120_01251) - 1350759..1351547 (+) 789 WP_040148165.1 TatD family hydrolase -
  BT137_RS06310 (EUL120_01252) - 1351659..1352759 (+) 1101 WP_027266544.1 anhydro-N-acetylmuramic acid kinase -
  BT137_RS06315 (EUL120_01253) - 1352815..1354107 (+) 1293 WP_038838272.1 MFS transporter -
  BT137_RS06320 (EUL120_01254) - 1354183..1355463 (-) 1281 WP_038838274.1 MFS transporter -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=1145612 BT137_RS06300 WP_025519545.1 1350362..1350703(+) (pilZ) [Legionella pneumophila strain ST42 isolate ST42]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=1145612 BT137_RS06300 WP_025519545.1 1350362..1350703(+) (pilZ) [Legionella pneumophila strain ST42 isolate ST42]
ATGACTGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTATATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains


Predicted by InterproScan.

(8-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1

  pilZ Legionella pneumophila strain ERS1305867

100

100

1


Multiple sequence alignment