Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | H044120014_RS10020 | Genome accession | NZ_LT632616 |
| Coordinates | 2203712..2204026 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain ST37 isolate ST37 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2198712..2209026
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H044120014_RS09990 (BT148_RS10045) | - | 2199141..2199641 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| H044120014_RS10000 (BT148_RS10055) | - | 2200133..2200993 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| H044120014_RS10005 (BT148_RS10060) | - | 2201110..2202303 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| H044120014_RS10010 (BT148_RS10065) | lpp1976 | 2202413..2202970 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| H044120014_RS10015 (BT148_RS10070) | lpp1977 | 2202967..2203773 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| H044120014_RS10020 (BT148_RS10075) | lpp1978 | 2203712..2204026 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| H044120014_RS10025 (BT148_RS10080) | hisC | 2204186..2205295 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| H044120014_RS10030 (BT148_RS10085) | - | 2205332..2205673 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| H044120014_RS10035 (BT148_RS10090) | secF | 2205846..2206763 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| H044120014_RS10040 (BT148_RS10095) | secD | 2206776..2208632 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| H044120014_RS10045 (BT148_RS10100) | yajC | 2208654..2208989 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=1145586 H044120014_RS10020 WP_010947713.1 2203712..2204026(-) (lpp1978) [Legionella pneumophila strain ST37 isolate ST37]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=1145586 H044120014_RS10020 WP_010947713.1 2203712..2204026(-) (lpp1978) [Legionella pneumophila strain ST37 isolate ST37]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |