Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | BQ6063_RS03325 | Genome accession | NZ_LT632615 |
| Coordinates | 688971..689678 (-) | Length | 235 a.a. |
| NCBI ID | WP_072356081.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain ST23 isolate ST23 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 683971..694678
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BQ6063_RS03310 (EUL28_00640) | - | 686846..687358 (-) | 513 | WP_010946366.1 | pilus assembly protein | - |
| BQ6063_RS03315 (EUL28_00641) | - | 687355..688422 (-) | 1068 | WP_061363867.1 | PilW family protein | - |
| BQ6063_RS03320 (EUL28_00642) | pilV | 688419..688958 (-) | 540 | WP_010946368.1 | type IV pilus modification protein PilV | - |
| BQ6063_RS03325 (EUL28_00643) | fimT | 688971..689678 (-) | 708 | WP_072356081.1 | GspH/FimT family pseudopilin | Machinery gene |
| BQ6063_RS03330 (EUL28_00644) | - | 689900..690760 (-) | 861 | WP_061363866.1 | polysaccharide deacetylase family protein | - |
| BQ6063_RS03335 (EUL28_00645) | - | 690937..692286 (-) | 1350 | WP_072356083.1 | lpg0634 family Dot/Icm T4SS effector | - |
| BQ6063_RS03340 (EUL28_00646) | - | 692576..694057 (+) | 1482 | WP_061638277.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24851.44 Da Isoelectric Point: 7.0381
>NTDB_id=1145521 BQ6063_RS03325 WP_072356081.1 688971..689678(-) (fimT) [Legionella pneumophila strain ST23 isolate ST23]
MNKVITESQKFTLRNLANMLFCVDGSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTLRNLANMLFCVDGSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1145521 BQ6063_RS03325 WP_072356081.1 688971..689678(-) (fimT) [Legionella pneumophila strain ST23 isolate ST23]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACTTAGCTAATATGTTATTTTGCGTTGATGGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACACAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACACTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGTCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACTTAGCTAATATGTTATTTTGCGTTGATGGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAACACAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACACTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGTCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
98.298 |
100 |
0.983 |