Detailed information NTG1145516

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: BQ6063_RS00765
• Genome accession: NZ_LT632615
• Coordinates: 166723..167415 (+)
• Length: 230 a.a.
• NCBI ID: WP_011212783.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain ST23 isolate ST23
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 161723..172415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BQ6063_RS00745 (EUL28_00144)	-	162344..162520 (-)	177	WP_072355908.1	dodecin domain-containing protein	-
BQ6063_RS00750 (EUL28_00145)	-	162698..165166 (+)	2469	WP_061637889.1	hypothetical protein	-
BQ6063_RS00755 (EUL28_00146)	dapB	165270..166001 (-)	732	WP_027225347.1	4-hydroxy-tetrahydrodipicolinate reductase	-
BQ6063_RS00760 (H044120014_RS00765)	-	166181..166366 (-)	186	WP_011212782.1	hypothetical protein	-
BQ6063_RS00765 (EUL28_00147)	rocC	166723..167415 (+)	693	WP_011212783.1	ProQ/FinO family protein	Regulator
BQ6063_RS00770 (EUL28_00148)	-	167416..168486 (+)	1071	WP_042754839.1	hypothetical protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25773.65 Da
• Isoelectric Point: 10.6563

>NTDB_id=1145516 BQ6063_RS00765 WP_011212783.1 166723..167415(+) (rocC) [Legionella pneumophila strain ST23 isolate ST23]
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGVSKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAENASMKIKKRVEKSVKNARKQVNAKAANHSYVNNQPSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEDKKETTE

Nucleotide

• Length: 693 bp

>NTDB_id=1145516 BQ6063_RS00765 WP_011212783.1 166723..167415(+) (rocC) [Legionella pneumophila strain ST23 isolate ST23]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAAGCGCGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAGTTTCTAAAAGCAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATCGATTTGCACGGAAATCCAGTAGCGGA
GGTTACTGAGGAAGAAGCGGAGAATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCATATGTAAATAATCAGCCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCTCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGATAAAAAGGAAACAACAGAGTAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	100	100	1