Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BT141_RS10380 | Genome accession | NZ_LT632614 |
| Coordinates | 2275036..2275350 (-) | Length | 104 a.a. |
| NCBI ID | WP_027220533.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain ST62 isolate ST62 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2270036..2280350
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BT141_RS10350 (H044120014_02054) | - | 2270461..2270961 (-) | 501 | WP_027220529.1 | hypothetical protein | - |
| BT141_RS10360 (H044120014_02055) | - | 2271453..2272313 (+) | 861 | WP_027220530.1 | polysaccharide deacetylase family protein | - |
| BT141_RS10365 (H044120014_02056) | - | 2272431..2273627 (-) | 1197 | WP_011214245.1 | murein transglycosylase A | - |
| BT141_RS10370 (H044120014_02057) | lpp1976 | 2273737..2274294 (-) | 558 | WP_027220531.1 | hypothetical protein | Machinery gene |
| BT141_RS10375 (H044120014_02058) | lpp1977 | 2274291..2275097 (-) | 807 | WP_050598614.1 | PilW family protein | Machinery gene |
| BT141_RS10380 (H044120014_02059) | lpp1978 | 2275036..2275350 (-) | 315 | WP_027220533.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BT141_RS10385 (H044120014_02060) | hisC | 2275510..2276619 (+) | 1110 | WP_027220534.1 | histidinol-phosphate transaminase | - |
| BT141_RS10390 (H044120014_02061) | - | 2276656..2276997 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BT141_RS10400 (H044120014_02063) | secF | 2277175..2278092 (-) | 918 | WP_027220536.1 | protein translocase subunit SecF | - |
| BT141_RS10405 (H044120014_02064) | secD | 2278105..2279961 (-) | 1857 | WP_027220537.1 | protein translocase subunit SecD | - |
| BT141_RS10410 (H044120014_02065) | yajC | 2279983..2280318 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12249.39 Da Isoelectric Point: 10.0591
>NTDB_id=1145504 BT141_RS10380 WP_027220533.1 2275036..2275350(-) (lpp1978) [Legionella pneumophila strain ST62 isolate ST62]
MSKHKGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
MSKHKGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1145504 BT141_RS10380 WP_027220533.1 2275036..2275350(-) (lpp1978) [Legionella pneumophila strain ST62 isolate ST62]
ATGAGCAAGCATAAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATCTGGCGAATCCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
ATGAGCAAGCATAAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATCTGGCGAATCCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
100 |
100 |
1 |
| lpp1978 | Legionella pneumophila str. Paris |
98.077 |
100 |
0.981 |