Detailed information NTG1145475

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: BT141_RS00685
• Genome accession: NZ_LT632614
• Coordinates: 153519..154211 (+)
• Length: 230 a.a.
• NCBI ID: WP_011212783.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain ST62 isolate ST62
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 148519..159211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BT141_RS00665 (H044120014_00130)	-	149140..149316 (-)	177	WP_014840774.1	dodecin domain-containing protein	-
BT141_RS00670 (H044120014_00131)	-	149494..151962 (+)	2469	WP_027225346.1	hypothetical protein	-
BT141_RS00675 (H044120014_00132)	dapB	152066..152797 (-)	732	WP_027225347.1	4-hydroxy-tetrahydrodipicolinate reductase	-
BT141_RS00680	-	152977..153162 (-)	186	WP_011212782.1	hypothetical protein	-
BT141_RS00685 (H044120014_00133)	rocC	153519..154211 (+)	693	WP_011212783.1	ProQ/FinO family protein	Regulator
BT141_RS00690 (H044120014_00134)	-	154212..155282 (+)	1071	WP_042754839.1	hypothetical protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25773.65 Da
• Isoelectric Point: 10.6563

>NTDB_id=1145475 BT141_RS00685 WP_011212783.1 153519..154211(+) (rocC) [Legionella pneumophila strain ST62 isolate ST62]
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGVSKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAENASMKIKKRVEKSVKNARKQVNAKAANHSYVNNQPSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEDKKETTE

Nucleotide

• Length: 693 bp

>NTDB_id=1145475 BT141_RS00685 WP_011212783.1 153519..154211(+) (rocC) [Legionella pneumophila strain ST62 isolate ST62]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAAGCGCGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAGTTTCTAAAAGCAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATCGATTTGCACGGAAATCCAGTAGCGGA
GGTTACTGAGGAAGAAGCGGAGAATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCATATGTAAATAATCAGCCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCTCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGATAAAAAGGAAACAACAGAGTAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	100	100	1