Detailed information NTG1145148

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: B5474_RS08855
• Genome accession: NZ_LT605059
• Coordinates: 1842498..1843199 (+)
• Length: 233 a.a.
• NCBI ID: WP_079548510.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain NCTC7364
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1837498..1848199

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B5474_RS08820 (NCTC7364_01768)	kdsB	1838021..1838782 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
B5474_RS08825 (NCTC7364_01769)	-	1838794..1839774 (+)	981	WP_038346636.1	DNA polymerase III subunit delta'	-
B5474_RS08830 (NCTC7364_01770)	-	1839786..1840127 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
B5474_RS08835 (NCTC7364_01771)	-	1840145..1840918 (+)	774	WP_000497298.1	TatD family hydrolase	-
B5474_RS08840 (NCTC7364_01772)	-	1840956..1841564 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
B5474_RS08845 (NCTC7364_01773)	-	1841574..1842128 (+)	555	WP_000841373.1	type II secretion system protein	-
B5474_RS08850 (NCTC7364_01774)	xcpV	1842118..1842498 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
B5474_RS08855 (NCTC7364_01775)	xcpW	1842498..1843199 (+)	702	WP_079548510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
B5474_RS08860 (NCTC7364_01776)	gspK	1843199..1844158 (+)	960	WP_000301468.1	type II secretion system minor pseudopilin GspK	-
B5474_RS08865 (NCTC7364_01777)	-	1844388..1844984 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
B5474_RS08870 (NCTC7364_01778)	ung	1845035..1845748 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
B5474_RS08875 (NCTC7364_01779)	-	1845745..1846869 (+)	1125	WP_150123679.1	enoyl-CoA hydratase/isomerase family protein	-
B5474_RS08880 (NCTC7364_01780)	tadA	1846876..1847379 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
B5474_RS08885 (NCTC7364_01781)	-	1847449..1847892 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26595.57 Da
• Isoelectric Point: 9.5501

>NTDB_id=1145148 B5474_RS08855 WP_079548510.1 1842498..1843199(+) (xcpW) [Acinetobacter baumannii strain NCTC7364]
MIKNKYLHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1145148 B5474_RS08855 WP_079548510.1 1842498..1843199(+) (xcpW) [Acinetobacter baumannii strain NCTC7364]
ATGATAAAAAATAAATATCTTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996