Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   STACADC2_RS07460 Genome accession   NZ_LT604076
Coordinates   1401053..1402129 (-) Length   358 a.a.
NCBI ID   WP_022096499.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ACA-DC     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1396053..1407129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STACADC2_RS07440 (STACADC2_1422) - 1397165..1399231 (-) 2067 WP_087010133.1 cation:proton antiporter -
  STACADC2_RS07445 (STACADC2_1423) - 1399240..1399482 (-) 243 WP_011226461.1 hypothetical protein -
  STACADC2_RS07450 (STACADC2_1424) - 1399479..1400027 (-) 549 WP_011226462.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  STACADC2_RS07455 (STACADC2_1425) - 1400024..1400968 (-) 945 WP_011226463.1 TIGR01212 family radical SAM protein -
  STACADC2_RS07460 (STACADC2_1426) sepM 1401053..1402129 (-) 1077 WP_022096499.1 SepM family pheromone-processing serine protease Regulator
  STACADC2_RS07465 (STACADC2_1427) coaD 1402107..1402604 (-) 498 WP_011226465.1 pantetheine-phosphate adenylyltransferase -
  STACADC2_RS07470 (STACADC2_1428) rsmD 1402638..1403237 (-) 600 Protein_1384 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  STACADC2_RS07475 (STACADC2_1429) trxB 1403328..1404281 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  STACADC2_RS07480 (STACADC2_1430) - 1404314..1404538 (-) 225 WP_087010135.1 DUF4059 family protein -
  STACADC2_RS07485 (STACADC2_1431) - 1404753..1405496 (-) 744 WP_087010136.1 amino acid ABC transporter ATP-binding protein -
  STACADC2_RS07490 (STACADC2_1432) - 1405496..1406419 (-) 924 WP_231906167.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39202.09 Da        Isoelectric Point: 9.4944

>NTDB_id=1145104 STACADC2_RS07460 WP_022096499.1 1401053..1402129(-) (sepM) [Streptococcus thermophilus strain ACA-DC]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=1145104 STACADC2_RS07460 WP_022096499.1 1401053..1402129(-) (sepM) [Streptococcus thermophilus strain ACA-DC]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATTGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterproScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.05

95.251

0.601


Multiple sequence alignment