Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BGLY_RS14435 | Genome accession | NZ_LT603683 |
| Coordinates | 2825883..2826218 (+) | Length | 111 a.a. |
| NCBI ID | WP_096891855.1 | Uniprot ID | - |
| Organism | Bacillus glycinifermentans isolate BGLY | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2820883..2831218
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGLY_RS14415 (BGLY_2909) | gcvT | 2821348..2822442 (-) | 1095 | WP_046129959.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| BGLY_RS14420 (BGLY_2910) | - | 2823022..2824689 (+) | 1668 | WP_046129960.1 | DEAD/DEAH box helicase | - |
| BGLY_RS14425 (BGLY_2911) | - | 2824693..2825487 (+) | 795 | WP_046129961.1 | YqhG family protein | - |
| BGLY_RS14430 (BGLY_2912) | sinI | 2825673..2825849 (+) | 177 | WP_046129962.1 | anti-repressor SinI | Regulator |
| BGLY_RS14435 (BGLY_2913) | sinR | 2825883..2826218 (+) | 336 | WP_096891855.1 | transcriptional regulator SinR | Regulator |
| BGLY_RS14440 (BGLY_2914) | tasA | 2826322..2827116 (-) | 795 | WP_046129964.1 | biofilm matrix protein TasA | - |
| BGLY_RS14445 (BGLY_2915) | sipW | 2827185..2827766 (-) | 582 | WP_046129965.1 | signal peptidase I SipW | - |
| BGLY_RS14450 (BGLY_2916) | tapA | 2827763..2828488 (-) | 726 | WP_046129966.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BGLY_RS14455 (BGLY_2917) | - | 2828751..2829074 (+) | 324 | WP_046129967.1 | DUF3889 domain-containing protein | - |
| BGLY_RS14460 (BGLY_2918) | - | 2829159..2829341 (-) | 183 | WP_046129968.1 | YqzE family protein | - |
| BGLY_RS14465 (BGLY_2919) | comGG | 2829423..2829788 (-) | 366 | WP_046129969.1 | competence type IV pilus minor pilin ComGG | - |
| BGLY_RS14470 (BGLY_2920) | comGF | 2829800..2830285 (-) | 486 | WP_082094061.1 | competence type IV pilus minor pilin ComGF | - |
| BGLY_RS14475 (BGLY_2921) | comGE | 2830200..2830547 (-) | 348 | WP_046129970.1 | competence type IV pilus minor pilin ComGE | - |
| BGLY_RS14480 (BGLY_2922) | comGD | 2830531..2830974 (-) | 444 | WP_046129971.1 | competence type IV pilus minor pilin ComGD | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12894.48 Da Isoelectric Point: 5.2973
>NTDB_id=1144983 BGLY_RS14435 WP_096891855.1 2825883..2826218(+) (sinR) [Bacillus glycinifermentans isolate BGLY]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKKSQEKE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKKSQEKE
Nucleotide
Download Length: 336 bp
>NTDB_id=1144983 BGLY_RS14435 WP_096891855.1 2825883..2826218(+) (sinR) [Bacillus glycinifermentans isolate BGLY]
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAATTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTTGATGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCGATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTACCAAAAATGGAAGAAGAG
TCAGGAAAAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAATTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTTGATGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCGATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTACCAAAAATGGAAGAAGAG
TCAGGAAAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |