Detailed information NTG1144760

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LPM7613_RS12735
• Genome accession: NZ_LT598657
• Coordinates: 2878116..2879183 (-)
• Length: 355 a.a.
• NCBI ID: WP_015443981.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain Lpm7613 isolate Lpm7613
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2873116..2884183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPM7613_RS12710	-	2873408..2874124 (-)	717	WP_010948365.1	dienelactone hydrolase family protein	-
LPM7613_RS12715	-	2874406..2875272 (+)	867	WP_015443982.1	alpha/beta hydrolase	-
LPM7613_RS12720	rpoH	2875405..2876259 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
LPM7613_RS12725	ftsX	2876556..2877485 (-)	930	WP_010948368.1	permease-like cell division protein FtsX	-
LPM7613_RS12730	ftsE	2877479..2878129 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
LPM7613_RS12735	pilA	2878116..2879183 (-)	1068	WP_015443981.1	signal recognition particle-docking protein FtsY	Machinery gene
LPM7613_RS12740	-	2879246..2880571 (+)	1326	WP_010948371.1	M16 family metallopeptidase	-
LPM7613_RS12745	-	2880568..2881872 (+)	1305	WP_010948372.1	M16 family metallopeptidase	-
LPM7613_RS12750	rsmD	2881869..2882414 (+)	546	WP_010948373.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LPM7613_RS12755	dotD	2882489..2882980 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
LPM7613_RS12760	dotC	2882961..2883872 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38999.64 Da
• Isoelectric Point: 6.1205

>NTDB_id=1144760 LPM7613_RS12735 WP_015443981.1 2878116..2879183(-) (pilA) [Legionella pneumophila strain Lpm7613 isolate Lpm7613]
MIKWFKRNQNSEPNLDAEEQQDHAKSSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYLTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=1144760 LPM7613_RS12735 WP_015443981.1 2878116..2879183(-) (pilA) [Legionella pneumophila strain Lpm7613 isolate Lpm7613]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATGCCGAAGAGCAACAAGATCATGCCAAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTAGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCACGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCTGACTCTAAAGACAAATTTGCAAACTATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATATTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.353	95.775	0.501