Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | LPM7613_RS03135 | Genome accession | NZ_LT598657 |
| Coordinates | 675253..675960 (-) | Length | 235 a.a. |
| NCBI ID | WP_011945794.1 | Uniprot ID | A0AAN5T2E4 |
| Organism | Legionella pneumophila strain Lpm7613 isolate Lpm7613 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 670253..680960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPM7613_RS03120 | - | 673128..673640 (-) | 513 | WP_011945791.1 | pilus assembly protein | - |
| LPM7613_RS03125 | - | 673637..674704 (-) | 1068 | WP_011945792.1 | PilW family protein | - |
| LPM7613_RS03130 | pilV | 674701..675240 (-) | 540 | WP_011945793.1 | type IV pilus modification protein PilV | - |
| LPM7613_RS03135 | fimT | 675253..675960 (-) | 708 | WP_011945794.1 | GspH/FimT family pseudopilin | Machinery gene |
| LPM7613_RS03140 | - | 676183..677043 (-) | 861 | WP_011945795.1 | polysaccharide deacetylase family protein | - |
| LPM7613_RS03145 | - | 677219..678568 (-) | 1350 | WP_072368662.1 | lpg0634 family Dot/Icm T4SS effector | - |
| LPM7613_RS03150 | - | 678858..680339 (+) | 1482 | WP_011945797.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24849.51 Da Isoelectric Point: 7.5609
>NTDB_id=1144728 LPM7613_RS03135 WP_011945794.1 675253..675960(-) (fimT) [Legionella pneumophila strain Lpm7613 isolate Lpm7613]
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=1144728 LPM7613_RS03135 WP_011945794.1 675253..675960(-) (fimT) [Legionella pneumophila strain Lpm7613 isolate Lpm7613]
TTGAACAAAGTGATAACGGAATCACAAAGGTTCACTCTGCGCAACGTAGCTAATATGTTATTGTGTGTGGATGCTAGTGT
ATTGCCCACACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGACCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATTATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATCGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACAGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTAAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACCGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCAGGAACAACACCCGGCCAGGCAGTCTGGAGTAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAGGTTCACTCTGCGCAACGTAGCTAATATGTTATTGTGTGTGGATGCTAGTGT
ATTGCCCACACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGACCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATTATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATCGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACAGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTAAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACCGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCAGGAACAACACCCGGCCAGGCAGTCTGGAGTAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
96.17 |
100 |
0.962 |