Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BAL062_RS10480 | Genome accession | NZ_LT594095 |
| Coordinates | 2194850..2195230 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain BAL062 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2189850..2200230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAL062_RS10450 (BAL062_02110) | tadA | 2189968..2190471 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| BAL062_RS10455 (BAL062_02111) | - | 2190478..2191602 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BAL062_RS10460 (BAL062_02112) | ung | 2191599..2192312 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| BAL062_RS10465 (BAL062_02113) | - | 2192363..2192959 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| BAL062_RS10470 (BAL062_02114) | gspK | 2193190..2194149 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| BAL062_RS10475 (BAL062_02115) | xcpW | 2194149..2194850 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BAL062_RS10480 (BAL062_02116) | xcpV | 2194850..2195230 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BAL062_RS10485 (BAL062_02117) | - | 2195220..2195774 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| BAL062_RS10490 (BAL062_02118) | - | 2195784..2196392 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| BAL062_RS10495 (BAL062_02119) | - | 2196430..2197203 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| BAL062_RS10500 (BAL062_02120) | - | 2197221..2197562 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| BAL062_RS10505 (BAL062_02121) | - | 2197574..2198554 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| BAL062_RS10510 (BAL062_02122) | kdsB | 2198566..2199327 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1144644 BAL062_RS10480 WP_000836911.1 2194850..2195230(-) (xcpV) [Acinetobacter baumannii strain BAL062]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1144644 BAL062_RS10480 WP_000836911.1 2194850..2195230(-) (xcpV) [Acinetobacter baumannii strain BAL062]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |